List of pathways, genes and/or enzymes identified for

"Metabolism of Aromatic compounds"

Metagenome name: 5r_R1

Metagenome ID : mgm4709723.3

Crop: Sugarcane

S. No. Category Pathway Gene/Enzyme Name
1.Anaerobic degradation of aromatic compoundsAcetophenone carboxylase 1Acetophenone carboxylase subunit Apc2
2.Anaerobic degradation of aromatic compoundsAnaerobic toluene and ethylbenzene degradation(S)-1-phenylethanol dehydrogenase
3.Anaerobic degradation of aromatic compoundsAnaerobic toluene and ethylbenzene degradation2-[hydroxy(phenyl)methyl]-succinyl-CoA dehydrogenase beta subunit (EC 1.1.1.35)
4.Anaerobic degradation of aromatic compoundsAnaerobic toluene and ethylbenzene degradationAcetophenone carboxylase subunit Apc1
5.Anaerobic degradation of aromatic compoundsAnaerobic toluene and ethylbenzene degradationBenzoylacetate CoA-ligase
6.Anaerobic degradation of aromatic compoundsAnaerobic toluene and ethylbenzene degradationPhenylitaconyl-CoA hydratase (EC 4.2.1.-)
7.Anaerobic degradation of aromatic compoundsAnaerobic toluene and ethylbenzene degradationSuccinyl-CoA:(R)-benzylsuccinate CoA-transferase subunit BbsF (EC 2.8.3.15)
8.Anaerobic degradation of aromatic compoundsHydroxyaromatic decarboxylase familyHydroxyaromatic non-oxidative decarboxylase protein B (EC 4.1.1.-)
9.Anaerobic degradation of aromatic compoundsHydroxyaromatic decarboxylase familyHydroxyaromatic non-oxidative decarboxylase protein C (EC 4.1.1.-)
10.Anaerobic degradation of aromatic compoundsAnaerobic benzoate metabolismGlutaryl-CoA dehydrogenase (EC 1.3.99.7)
11.Anaerobic degradation of aromatic compoundsAnaerobic benzoate metabolismCyclohex-1-ene-1-carboxyl-CoA hydratase (EC 4.2.1.17)
12.Anaerobic degradation of aromatic compoundsAcetophenone carboxylase 1Acetophenone carboxylase subunit Apc3
13.Anaerobic degradation of aromatic compoundsAcetophenone carboxylase 1Acetophenone carboxylase subunit Apc4
14.Anaerobic degradation of aromatic compoundsAnaerobic benzoate metabolism2-hydroxycyclohexanecarboxyl-CoA dehydrogenase (EC 1.1.1.-)
15.Anaerobic degradation of aromatic compoundsAnaerobic benzoate metabolism2-ketocyclohexanecarboxyl-CoA hydrolase (EC 4.1.3.36)
16.Anaerobic degradation of aromatic compoundsAnaerobic benzoate metabolismBenzoate-CoA ligase (EC 6.2.1.25)
17.Anaerobic degradation of aromatic compoundsAnaerobic benzoate metabolismBenzoyl-CoA reductase subunit BadD (EC 1.3.99.15)
18.Anaerobic degradation of aromatic compoundsAnaerobic benzoate metabolismBenzoyl-CoA reductase subunit BadE (EC 1.3.99.15)
19.Anaerobic degradation of aromatic compoundsAnaerobic benzoate metabolismBenzoyl-CoA reductase subunit BadG (EC 1.3.99.15)
20.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathway4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
21.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathway3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase
22.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathway3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6)
23.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathway3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2)
24.Metabolism of central aromatic intermediatesN-heterocyclic aromatic compound degradationIsoquinoline 1-oxidoreductase beta subunit (EC 1.3.99.16)
25.Metabolism of central aromatic intermediatesN-heterocyclic aromatic compound degradationIsoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16)
26.Metabolism of central aromatic intermediatesHomogentisate pathway of aromatic compound degradationTranscriptional regulator, IclR family
27.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathwayBeta-ketoadipyl CoA thiolase (EC 2.3.1.-)
28.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathwayPca regulon regulatory protein PcaR
29.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathwayProtocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3)
30.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathwayProtocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3)
31.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathwaydicarboxylic acid transporter PcaT
32.Metabolism of central aromatic intermediatesSalicylate and gentisate catabolismAreA (Esterase for aryl ester catabolic pathway) (EC 3.1.1.-)
33.Metabolism of central aromatic intermediatesSalicylate and gentisate catabolismFumarylacetoacetate (FAA) hydrolase (EC 3.7.1.5)
34.Metabolism of central aromatic intermediatesSalicylate and gentisate catabolismFumarylacetoacetate (FAA) hydrolase (EC 4.1.1.68)
35.Metabolism of central aromatic intermediatesSalicylate and gentisate catabolismMaleate cis-trans isomerase (EC 5.2.1.1)
36.Metabolism of central aromatic intermediatesSalicylate and gentisate catabolismsalicylate esterase
37.Metabolism of central aromatic intermediatesHomogentisate pathway of aromatic compound degradationPossible 3-(3-hydroxy-phenyl)propionate hydroxylase (EC 1.14.13.-)
38.Metabolism of central aromatic intermediatesHomogentisate pathway of aromatic compound degradationFumarylacetoacetase (EC 3.7.1.2)
39.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradationProtocatechuate 4,5-dioxygenase beta chain (EC 1.13.11.8)
40.Metabolism of central aromatic intermediates4-Hydroxyphenylacetic acid catabolic pathway4-hydroxyphenylacetate 3-monooxygenase, reductase component (EC 1.6.8.-)
41.Metabolism of central aromatic intermediates4-Hydroxyphenylacetic acid catabolic pathway4-hydroxyphenylacetate symporter, major facilitator superfamily (MFS)
42.Metabolism of central aromatic intermediatesCatechol branch of beta-ketoadipate pathway3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6)
43.Metabolism of central aromatic intermediatesCatechol branch of beta-ketoadipate pathway3-oxoadipate enol-lactone hydrolase
44.Metabolism of central aromatic intermediatesCatechol branch of beta-ketoadipate pathwayMuconolactone isomerase (EC 5.3.3.4)
45.Metabolism of central aromatic intermediatesCatechol branch of beta-ketoadipate pathwayMuconolactone isomerase (EC 5.3.3.4),putative
46.Metabolism of central aromatic intermediatesCatechol branch of beta-ketoadipate pathwaymandelate racemase/muconate lactonizing enzyme family protein
47.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradation2-hydroxymuconic semialdehyde dehydrogenase
48.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradation2-hydroxymuconic semialdehyde hydrolase (EC 3.7.1.9)
49.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradation2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC 4.2.-.-)
50.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradationProtocatechuate 4,5-dioxygenase alpha chain (EC 1.13.11.8)
51.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradationIntradiol ring-cleavage dioxygenase (EC 1.13.11.1)
52.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradationCatechol 2,3-dioxygenase (EC 1.13.11.2)
53.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradation5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10)
54.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradation4-oxalocrotonate tautomerase (EC 5.3.2.-)
55.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradation3,4-dihydroxyphenylacetate 2,3-dioxygenase
56.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradation2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
57.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetate degradation enoyl-CoA hydratase PaaA (EC 4.2.1.17)
58.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetaldehyde dehydrogenase (EC 1.2.1.39)
59.NULLPhenylacetyl-CoA catabolic pathway (core)Acetate permease ActP (cation/acetate symporter) PaaL
60.NULLPhenylacetyl-CoA catabolic pathway (core)3-hydroxyacyl-CoA dehydrogenase PaaC (EC 1.1.1.-)
61.NULLp-cymene degradationp-cumic aldehyde dehydrogenase (CymC) [EC:1.2.1.3]
62.NULLp-cymene degradationp-cumic alcohol dehydrogenase (CymB)
63.NULLp-cymene degradationp-cumate dioxygenase small subunit (CmtAc)
64.NULLp-cymene degradationp-cumate dioxygenase large subunit (CmtAb)
65.NULLp-cymene degradationHOMODA hydrolase (CmtE) (EC 3.7.1.-)
66.NULLp-cymene degradation2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC)
67.NULLGentisare degradationputative 4-hydroxybenzoyl-CoA thioesterase
68.NULLGentisare degradationPutative n-hydroxybenzoate hydroxylase
69.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetate degradation enoyl-CoA hydratase PaaB (EC 4.2.1.17)
70.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetate-CoA oxygenase, PaaG subunit
71.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetate-CoA oxygenase, PaaH subunit
72.NULLToluene 4-monooxygenase (T4MO)Toluene-4-monooxygenase, subunit TmoA
73.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetic acid degradation protein PaaY
74.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetic acid degradation protein PaaN2, ring-opening aldehyde dehydrogenase (EC 1.2.1.3)
75.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetic acid degradation protein PaaN, ring-opening aldehyde dehydrogenase (EC 1.2.1.3)
76.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetic acid degradation protein PaaE, ketothiolase
77.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetic acid degradation protein PaaD, thioesterase
78.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetic acid degradation operon negative regulatory protein PaaX
79.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetate-coenzyme A ligase (EC 6.2.1.30) PaaF
80.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetate-CoA oxygenase/reductase, PaaK subunit
81.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetate-CoA oxygenase, PaaJ subunit
82.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetate-CoA oxygenase, PaaI subunit
83.NULLToluene 4-monooxygenase (T4MO)Toluene-4-monooxygenase, subunit TmoC
84.NULLGentisare degradationGentisate 1,2-dioxygenase (EC 1.13.11.4)
85.NULLAromatic Amin Catabolism4-hydroxyphenylacetate 3-monooxygenase (EC 1.14.13.3)
86.NULLBenzoate transport and degradation clusterBenzoate transport, extracellular ligand-binding receptor
87.NULLBenzoate transport and degradation clusterBenzoate transport, ATPase component
88.NULLBenzoate transport and degradation clusterBenzoate transport, ATP binding protein
89.NULLBenzoate transport and degradation clusterBenzoate transport related protein
90.NULLBenzoate transport and degradation cluster4-oxalocrotonate decarboxylase (EC 4.1.1.77)
91.NULLBenzoate transport and degradation cluster4-hydroxybenzoyl-CoA reductase, gamma subunit (EC 1.3.99.20)
92.NULLBenzoate transport and degradation cluster4-hydroxybenzoyl-CoA reductase, beta subunit (EC 1.3.99.20)
93.NULLBenzoate transport and degradation cluster3-hydroxyacyl-CoA dehydrogenase (PaaH) (EC 1.1.1.157)
94.NULLBenzoate transport and degradation cluster2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
95.NULLAromatic Amin CatabolismNitrilotriacetate monooxygenase component B (EC 1.14.13.-)
96.NULLAromatic Amin CatabolismAldehyde dehydrogenase (EC 1.2.1.3), PaaZ
97.NULLBenzoate transport and degradation clusterBenzoate transport, inner membrane transport component
98.NULLBenzoate transport and degradation clusterBenzoate transport, inner-membrane translocator
99.NULLBenzoate transport and degradation clusterBenzoate transport, inner-membrane translocator precursor
100.NULLGentisare degradationFumarylacetoacetate hydrolase family protein
101.NULLGentisare degradation4-hydroxybenzoate transporter
102.NULLCresol degradation4-cresol dehydrogenase [hydroxylating] flavoprotein subunit (EC 1.17.99.1)
103.NULLcarbazol degradation cluster4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
104.NULLBenzoate transport and degradation clusterbenzoyl-CoA-dihydrodiol lyase (BoxC)
105.NULLBenzoate transport and degradation clusterbenzoate degradation ring-cleavage hydrolase
106.NULLBenzoate transport and degradation clusterShikimate kinase I (EC 2.7.1.71)
107.NULLBenzoate transport and degradation clusterRegulatory protein of benzoate catabolism
108.NULLBenzoate transport and degradation clusterP-hydroxylaminobenzoate lyase
109.NULLBenzoate transport and degradation clusterBeta-ketoadipyl CoA thiolase (EC 2.3.1.9)
110.NULLBenzoate transport and degradation clusterBenzoyl-CoA oxygenase component B
111.NULLBenzoate transport and degradation clusterBenzoyl-CoA oxygenase component A
112.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationLignostilbene-alpha,beta-dioxygenase and related enzymes
113.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationPhenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
114.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationProbable FERULOYL-CoA synthetase protein
115.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationProbable VANILLIN dehydrogenase oxidoreductase protein (EC 1.-.-.-)
116.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationProbable vanillate O-demethylase oxygenase subunit oxidoreductase protein (EC 1.14.13.-)
117.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationFeruloyl-CoA synthetase
118.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationChlorogenate esterase
119.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradation4-hydroxycinnamoyl CoA hydratase/lyase (Enoyl-CoA hydratase/lyase) (EC 4.2.1.17)
120.Peripheral pathways for catabolism of aromatic compoundsPhenol hydroxylasePositive regulator of phenol hydroxylase
121.Peripheral pathways for catabolism of aromatic compoundsPhenol hydroxylasePhenol hydroxylase, P3 oxygenase component DmpN (EC 1.14.13.7)
122.Peripheral pathways for catabolism of aromatic compoundsPhenol hydroxylasePhenol hydroxylase, P2 regulatory component DmpM (EC 1.14.13.7)
123.Peripheral pathways for catabolism of aromatic compoundsn-Phenylalkanoic acid degradationenoyl-CoA hydratase, R-specific
124.Peripheral pathways for catabolism of aromatic compoundsn-Phenylalkanoic acid degradationLong-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
125.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationProtein involved in meta-pathway of phenol degradation
126.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationPutative 3-alpha-hydroxysteroid dehydrogenase/carbonyl reductase oxidoreductase protein (EC 1.1.1.50)
127.Peripheral pathways for catabolism of aromatic compoundsToluene degradationToluate 1,2-dioxygenase electron transfer component
128.Peripheral pathways for catabolism of aromatic compoundsSalicylate ester degradationSalicylate hydroxylase (EC 1.14.13.1)
129.Peripheral pathways for catabolism of aromatic compoundsSalicylate ester degradationAreB (Aryl-alcohol dehydrogenase) (EC 1.1.1.90)
130.Peripheral pathways for catabolism of aromatic compoundsp-Hydroxybenzoate degradationP-hydroxybenzoate hydroxylase (EC 1.14.13.2)
131.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationvanillin dehydrogenase
132.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationlignostilbene-alpha,beta-dioxygenase
133.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationVanillate O-demethylase oxygenase subunit (EC 1.14.13.82)
134.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationTranscriptional regulator for ferulate or vanillate catabolism
135.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationTannase and feruloyl esterase precursor
136.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationPutative phthalate 4,5-dioxygenase reductase subunit (OhpA1)
137.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationPutative phthalate 4,5-dioxygenase oxygenase subunit (OhpA2)
138.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationPutative benzaldehyde dehydrogenase oxidoreductase protein (EC 1.2.1.28)
139.Peripheral pathways for catabolism of aromatic compoundsToluene degradationtoluenesulfonate zinc-independent alcohol dehydrogenase
140.Peripheral pathways for catabolism of aromatic compoundsNaphtalene and antracene degradation2-hydroxychromene-2-carboxylate isomerase
141.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradationbenzoate dioxygenase, ferredoxin reductase component
142.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradationbenzoate MFS transporter BenK
143.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradationbenABC operon transcriptional activator BenR
144.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradationRing hydroxylating dioxygenase, alpha subunit (EC 1.14.12.13)
145.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradationOrtho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA
146.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradationOrtho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB
147.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradationBenzoylformate decarboxylase (EC 4.1.1.7)
148.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradationBenzoate transport protein
149.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradationBenzoate 1,2-dioxygenase alpha subunit (EC 1.14.12.10)
150.Peripheral pathways for catabolism of aromatic compoundsBenzoate catabolismMuconate cycloisomerase (EC 5.5.1.1)
151.Peripheral pathways for catabolism of aromatic compoundsBenzoate catabolismBenzoate 1,2-dioxygenase (EC 1.14.12.10)
152.Peripheral pathways for catabolism of aromatic compoundsBenzoate catabolismAcetyl-CoA C-acyltransferase (EC 2.3.1.16)
153.Peripheral pathways for catabolism of aromatic compoundsBiphenyl Degradation2,3-dihydroxybiphenyl 1,2-dioxygenase
154.Peripheral pathways for catabolism of aromatic compoundsBiphenyl Degradation2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
155.Peripheral pathways for catabolism of aromatic compoundsNaphtalene and antracene degradation2,3-dihydroxy-2,3-dihydro-phenylpropionate dehydrogenase (EC 1.3.1.-)
156.Peripheral pathways for catabolism of aromatic compoundsChlorobenzoate degradation2-chlorobenzoate 1,2-dioxygenase reductase component
157.Peripheral pathways for catabolism of aromatic compoundsChloroaromatic degradation pathwayBeta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24)
158.Peripheral pathways for catabolism of aromatic compoundsBiphenyl Degradationbiphenyl-2,3-diol 1,2-dioxygenase III-related protein
159.Peripheral pathways for catabolism of aromatic compoundsBiphenyl DegradationLarge subunit naph/bph dioxygenase
160.Peripheral pathways for catabolism of aromatic compoundsBiphenyl DegradationDihydrodiol dehydrogenase (EC 1.3.1.56)
161.Peripheral pathways for catabolism of aromatic compoundsBiphenyl DegradationBiphenyl-2,3-diol 1,2-dioxygenase (EC 1.13.11.39)
162.Peripheral pathways for catabolism of aromatic compoundsBiphenyl DegradationBiphenyl dioxygenase system ferredoxin component
163.Peripheral pathways for catabolism of aromatic compoundsBiphenyl DegradationBiphenyl dioxygenase beta subunit (EC 1.14.12.18)
164.Peripheral pathways for catabolism of aromatic compoundsBiphenyl DegradationBiphenyl dioxygenase alpha subunit (EC 1.14.12.18)
165.Peripheral pathways for catabolism of aromatic compoundsBiphenyl DegradationAcetaldehyde dehydrogenase, acetylating, (EC 1.2.1.10) in gene cluster for degradation of phenols, cresols, catechol
166.Peripheral pathways for catabolism of aromatic compoundsBiphenyl Degradation2-keto-4-pentenoate hydratase (EC 4.2.1.-)
167.Peripheral pathways for catabolism of aromatic compoundsBenzoate catabolism3-Oxoadipate enol-lactonase (EC 3.1.1.24)