List of pathways, genes and/or enzymes identified for

"Metabolism of Aromatic compounds"

Metagenome name: 1r_R2

Metagenome ID : mgm4709741.3

Crop: Sugarcane

S. No. Category Pathway Gene/Enzyme Name
1.Anaerobic degradation of aromatic compoundsAcetophenone carboxylase 1Acetophenone carboxylase subunit Apc1
2.Anaerobic degradation of aromatic compoundsAnaerobic toluene and ethylbenzene degradationSuccinyl-CoA:(R)-benzylsuccinate CoA-transferase subunit BbsF (EC 2.8.3.15)
3.Anaerobic degradation of aromatic compoundsAnaerobic toluene and ethylbenzene degradationSuccinyl-CoA:(R)-benzylsuccinate CoA-transferase subunit BbsE (EC 2.8.3.15)
4.Anaerobic degradation of aromatic compoundsAnaerobic toluene and ethylbenzene degradationBenzoylacetate CoA-ligase
5.Anaerobic degradation of aromatic compoundsAnaerobic toluene and ethylbenzene degradation2-[hydroxy(phenyl)methyl]-succinyl-CoA dehydrogenase beta subunit (EC 1.1.1.35)
6.Anaerobic degradation of aromatic compoundsAnaerobic toluene and ethylbenzene degradation(S)-1-phenylethanol dehydrogenase
7.Anaerobic degradation of aromatic compoundsAnaerobic benzoate metabolismGlutaryl-CoA dehydrogenase (EC 1.3.99.7)
8.Anaerobic degradation of aromatic compoundsAnaerobic benzoate metabolismCyclohex-1-ene-1-carboxyl-CoA hydratase (EC 4.2.1.17)
9.Anaerobic degradation of aromatic compoundsAnaerobic benzoate metabolismBenzoyl-CoA reductase subunit BadG (EC 1.3.99.15)
10.Anaerobic degradation of aromatic compoundsAnaerobic benzoate metabolismBenzoyl-CoA reductase subunit BadF (EC 1.3.99.15)
11.Anaerobic degradation of aromatic compoundsAcetophenone carboxylase 1Acetophenone carboxylase subunit Apc3
12.Anaerobic degradation of aromatic compoundsAcetophenone carboxylase 1Acetophenone carboxylase subunit Apc4
13.Anaerobic degradation of aromatic compoundsAnaerobic benzoate metabolism2-hydroxycyclohexanecarboxyl-CoA dehydrogenase (EC 1.1.1.-)
14.Anaerobic degradation of aromatic compoundsAnaerobic benzoate metabolism2-ketocyclohexanecarboxyl-CoA hydrolase (EC 4.1.3.36)
15.Anaerobic degradation of aromatic compoundsAnaerobic benzoate metabolismBenzoyl-CoA reductase subunit BadD (EC 1.3.99.15)
16.Anaerobic degradation of aromatic compoundsAnaerobic benzoate metabolismBenzoyl-CoA reductase subunit BadE (EC 1.3.99.15)
17.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathway4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
18.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathway3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase
19.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathway3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6)
20.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathway3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2)
21.Metabolism of central aromatic intermediatesN-heterocyclic aromatic compound degradation1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase
22.Metabolism of central aromatic intermediatesHomogentisate pathway of aromatic compound degradationTranscriptional regulator, IclR family
23.Metabolism of central aromatic intermediatesHomogentisate pathway of aromatic compound degradationPossible 3-(3-hydroxy-phenyl)propionate hydroxylase (EC 1.14.13.-)
24.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradationProtocatechuate 4,5-dioxygenase beta chain (EC 1.13.11.8)
25.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathwayBeta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24)
26.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathwayPca regulon regulatory protein PcaR
27.Metabolism of central aromatic intermediatesSalicylate and gentisate catabolismsalicylate esterase
28.Metabolism of central aromatic intermediatesSalicylate and gentisate catabolismPutative n-hydroxybenzoate hydroxylase
29.Metabolism of central aromatic intermediatesSalicylate and gentisate catabolismMaleate cis-trans isomerase (EC 5.2.1.1)
30.Metabolism of central aromatic intermediatesSalicylate and gentisate catabolismGentisate 1,2-dioxygenase (EC 1.13.11.4)
31.Metabolism of central aromatic intermediatesSalicylate and gentisate catabolismFumarylacetoacetate (FAA) hydrolase (EC 4.1.1.68)
32.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathwaydicarboxylic acid transporter PcaT
33.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathwayProtocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3)
34.Metabolism of central aromatic intermediatesProtocatechuate branch of beta-ketoadipate pathwayProtocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3)
35.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradationProtocatechuate 4,5-dioxygenase alpha chain (EC 1.13.11.8)
36.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradationIntradiol ring-cleavage dioxygenase (EC 1.13.11.1)
37.Metabolism of central aromatic intermediatesCatechol branch of beta-ketoadipate pathwayCatechol 1,2-dioxygenase 1 (EC 1.13.11.1)
38.Metabolism of central aromatic intermediatesCatechol branch of beta-ketoadipate pathway3-oxoadipate enol-lactone hydrolase
39.Metabolism of central aromatic intermediatesCatechol branch of beta-ketoadipate pathway3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6)
40.Metabolism of central aromatic intermediates4-Hydroxyphenylacetic acid catabolic pathway5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68)
41.Metabolism of central aromatic intermediates4-Hydroxyphenylacetic acid catabolic pathway4-hydroxyphenylacetate symporter, major facilitator superfamily (MFS)
42.Metabolism of central aromatic intermediates4-Hydroxyphenylacetic acid catabolic pathway4-hydroxyphenylacetate 3-monooxygenase, reductase component (EC 1.6.8.-)
43.Metabolism of central aromatic intermediates4-Hydroxyphenylacetic acid catabolic pathway2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC 4.2.-.-)
44.Metabolism of central aromatic intermediates4-Hydroxyphenylacetic acid catabolic pathway2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-)
45.Metabolism of central aromatic intermediatesCatechol branch of beta-ketoadipate pathwayMuconolactone isomerase (EC 5.3.3.4),putative
46.Metabolism of central aromatic intermediatesCatechol branch of beta-ketoadipate pathwaymandelate racemase/muconate lactonizing enzyme family protein
47.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradationCatechol 2,3-dioxygenase (EC 1.13.11.2)
48.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradation5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC 1.2.1.60)
49.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradation5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10)
50.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradation4-oxalocrotonate tautomerase (EC 5.3.2.-)
51.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradation3,4-dihydroxyphenylacetate 2,3-dioxygenase (EC 1.13.11.15)
52.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradation3,4-dihydroxyphenylacetate 2,3-dioxygenase
53.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradation2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
54.Metabolism of central aromatic intermediatesCentral meta-cleavage pathway of aromatic compound degradation2-hydroxymuconic semialdehyde hydrolase (EC 3.7.1.9)
55.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetate degradation enoyl-CoA hydratase PaaA (EC 4.2.1.17)
56.NULLPhenylacetyl-CoA catabolic pathway (core)Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
57.NULLPhenylacetyl-CoA catabolic pathway (core)3-hydroxyacyl-CoA dehydrogenase PaaC (EC 1.1.1.-)
58.NULLp-cymene degradationp-cumic aldehyde dehydrogenase (CymC) [EC:1.2.1.3]
59.NULLp-cymene degradationp-cumic alcohol dehydrogenase (CymB)
60.NULLp-cymene degradationp-cumate dioxygenase large subunit (CmtAb)
61.NULLGentisare degradationputative 4-hydroxybenzoyl-CoA thioesterase
62.NULLGentisare degradationFumarylacetoacetate hydrolase family protein
63.NULLCresol degradation4-cresol dehydrogenase [hydroxylating] flavoprotein subunit (EC 1.17.99.1)
64.NULLcarbazol degradation cluster4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
65.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetate degradation enoyl-CoA hydratase PaaB (EC 4.2.1.17)
66.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetate-CoA oxygenase, PaaG subunit
67.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetate-CoA oxygenase, PaaH subunit
68.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetic acid degradation protein PaaN2, ring-opening aldehyde dehydrogenase (EC 1.2.1.3)
69.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetic acid degradation protein PaaN, ring-opening aldehyde dehydrogenase (EC 1.2.1.3)
70.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetic acid degradation protein PaaE, ketothiolase
71.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetic acid degradation protein PaaD, thioesterase
72.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetic acid degradation operon negative regulatory protein PaaX
73.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetate-coenzyme A ligase (EC 6.2.1.30) PaaF
74.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetate-CoA oxygenase/reductase, PaaK subunit
75.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetate-CoA oxygenase, PaaJ subunit
76.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetate-CoA oxygenase, PaaI subunit
77.NULLPhenylacetyl-CoA catabolic pathway (core)Phenylacetic acid degradation protein PaaY
78.NULLcarbazol degradation cluster2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
79.NULLBenzoate transport and degradation clusterBenzoate transport, ATP binding protein
80.NULLBenzoate transport and degradation clusterBenzoate transport related protein
81.NULLBenzoate transport and degradation cluster4-oxalocrotonate decarboxylase (EC 4.1.1.77)
82.NULLBenzoate transport and degradation cluster4-hydroxybenzoyl-CoA reductase, gamma subunit (EC 1.3.99.20)
83.NULLBenzoate transport and degradation cluster4-hydroxybenzoyl-CoA reductase, beta subunit (EC 1.3.99.20)
84.NULLBenzoate transport and degradation cluster3-hydroxyacyl-CoA dehydrogenase (PaaH) (EC 1.1.1.157)
85.NULLBenzoate transport and degradation cluster2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
86.NULLAromatic Amin CatabolismPhenylacetaldehyde dehydrogenase (EC 1.2.1.39)
87.NULLAromatic Amin CatabolismNitrilotriacetate monooxygenase component B (EC 1.14.13.-)
88.NULLAromatic Amin Catabolism4-hydroxyphenylacetate 3-monooxygenase (EC 1.14.13.3)
89.NULLBenzoate transport and degradation clusterBenzoate transport, ATPase component
90.NULLBenzoate transport and degradation clusterBenzoate transport, extracellular ligand-binding receptor
91.NULLBenzoate transport and degradation clusterbenzoyl-CoA-dihydrodiol lyase (BoxC)
92.NULLBenzoate transport and degradation clusterbenzoate degradation ring-cleavage hydrolase
93.NULLBenzoate transport and degradation clusterShikimate kinase I (EC 2.7.1.71)
94.NULLBenzoate transport and degradation clusterRegulatory protein of benzoate catabolism
95.NULLBenzoate transport and degradation clusterMethylglutaconyl-CoA hydratase (EC 4.2.1.18)
96.NULLBenzoate transport and degradation clusterBenzoyl-CoA oxygenase component B
97.NULLBenzoate transport and degradation clusterBenzoyl-CoA oxygenase component A
98.NULLBenzoate transport and degradation clusterBenzoate-CoA ligase (EC 6.2.1.25)
99.NULLBenzoate transport and degradation clusterBenzoate transport, inner-membrane translocator precursor
100.NULLBenzoate transport and degradation clusterBenzoate transport, inner-membrane translocator
101.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationFeruloyl-CoA synthetase
102.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationLignostilbene-alpha,beta-dioxygenase and related enzymes
103.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationPhenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
104.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationProbable FERULOYL-CoA synthetase protein
105.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationProbable VANILLIN dehydrogenase oxidoreductase protein (EC 1.-.-.-)
106.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationProbable vanillate O-demethylase oxygenase subunit oxidoreductase protein (EC 1.14.13.-)
107.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationChlorogenate esterase
108.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradation4-hydroxycinnamoyl CoA hydratase/lyase (Enoyl-CoA hydratase/lyase) (EC 4.2.1.17)
109.Peripheral pathways for catabolism of aromatic compoundsPhenol hydroxylasePositive regulator of phenol hydroxylase
110.Peripheral pathways for catabolism of aromatic compoundsPhenol hydroxylasePhenol hydroxylase, P3 oxygenase component DmpN (EC 1.14.13.7)
111.Peripheral pathways for catabolism of aromatic compoundsPhenol hydroxylasePhenol hydroxylase, P2 regulatory component DmpM (EC 1.14.13.7)
112.Peripheral pathways for catabolism of aromatic compoundsn-Phenylalkanoic acid degradationenoyl-CoA hydratase, R-specific
113.Peripheral pathways for catabolism of aromatic compoundsn-Phenylalkanoic acid degradationPutative 3-hydroxyacyl-coa dehydrogenase
114.Peripheral pathways for catabolism of aromatic compoundsn-Phenylalkanoic acid degradationLong-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
115.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationProtein involved in meta-pathway of phenol degradation
116.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationPutative 3-alpha-hydroxysteroid dehydrogenase/carbonyl reductase oxidoreductase protein (EC 1.1.1.50)
117.Peripheral pathways for catabolism of aromatic compoundsSalicylate ester degradationSalicylate hydroxylase (EC 1.14.13.1)
118.Peripheral pathways for catabolism of aromatic compoundsSalicylate ester degradationAreB (Aryl-alcohol dehydrogenase) (EC 1.1.1.90)
119.Peripheral pathways for catabolism of aromatic compoundsQuinate degradation3-dehydroquinate dehydratase I (EC 4.2.1.10)
120.Peripheral pathways for catabolism of aromatic compoundsp-Hydroxybenzoate degradationP-hydroxybenzoate hydroxylase (EC 1.14.13.2)
121.Peripheral pathways for catabolism of aromatic compoundsp-Hydroxybenzoate degradation4-hydroxybenzoate transporter
122.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationvanillin dehydrogenase
123.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationlignostilbene-alpha,beta-dioxygenase
124.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationVanillin dehydrogenase (Hydroxybenzaldehyde dehydrogenase) (EC 1.2.1.28)
125.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationVanillate O-demethylase oxygenase subunit (EC 1.14.13.82)
126.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationVanillate O-demethylase oxidoreductase (EC 1.14.13.-)
127.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationTannase and feruloyl esterase precursor
128.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationPutative phthalate 4,5-dioxygenase reductase subunit (OhpA1)
129.Peripheral pathways for catabolism of aromatic compoundsPhenylpropanoid compound degradationPutative phthalate 4,5-dioxygenase oxygenase subunit (OhpA2)
130.Peripheral pathways for catabolism of aromatic compoundsToluene degradationtoluenesulfonate zinc-independent alcohol dehydrogenase
131.Peripheral pathways for catabolism of aromatic compoundsNaphtalene and antracene degradationnaphthalene dioxygenase ferredoxin
132.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradationbenzoate MFS transporter BenK
133.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradationbenABC operon transcriptional activator BenR
134.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradationRing hydroxylating dioxygenase, alpha subunit (EC 1.14.12.13)
135.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradationOrtho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA
136.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradationOrtho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB
137.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradationBenzoylformate decarboxylase (EC 4.1.1.7)
138.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradationBenzoate transport protein
139.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradationBenzoate 1,2-dioxygenase alpha subunit (EC 1.14.12.10)
140.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradation1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase (EC 1.3.1.25)
141.Peripheral pathways for catabolism of aromatic compoundsBenzoate catabolismMuconolactone isomerase (EC 5.3.3.4)
142.Peripheral pathways for catabolism of aromatic compoundsBenzoate catabolismMuconate cycloisomerase (EC 5.5.1.1)
143.Peripheral pathways for catabolism of aromatic compoundsBenzoate catabolismBenzoate 1,2-dioxygenase (EC 1.14.12.10)
144.Peripheral pathways for catabolism of aromatic compoundsBenzoate catabolismAcetyl-CoA C-acyltransferase (EC 2.3.1.16)
145.Peripheral pathways for catabolism of aromatic compoundsBenzoate degradationbenzoate dioxygenase, ferredoxin reductase component
146.Peripheral pathways for catabolism of aromatic compoundsBiphenyl Degradation2,3-dihydroxybiphenyl 1,2-dioxygenase
147.Peripheral pathways for catabolism of aromatic compoundsNaphtalene and antracene degradationSalicylaldehyde dehydrogenase (EC 1.2.1.65)
148.Peripheral pathways for catabolism of aromatic compoundsNaphtalene and antracene degradation2-hydroxychromene-2-carboxylate isomerase
149.Peripheral pathways for catabolism of aromatic compoundsChlorobenzoate degradationPutative benzaldehyde dehydrogenase oxidoreductase protein (EC 1.2.1.28)
150.Peripheral pathways for catabolism of aromatic compoundsChlorobenzoate degradationCatechol 1,2-dioxygenase (EC 1.13.11.1)
151.Peripheral pathways for catabolism of aromatic compoundsChlorobenzoate degradation2-chlorobenzoate 1,2-dioxygenase reductase component
152.Peripheral pathways for catabolism of aromatic compoundsChloroaromatic degradation pathwayBeta-ketoadipyl CoA thiolase (EC 2.3.1.-)
153.Peripheral pathways for catabolism of aromatic compoundsBiphenyl Degradationbiphenyl-2,3-diol 1,2-dioxygenase III-related protein
154.Peripheral pathways for catabolism of aromatic compoundsBiphenyl DegradationSmall subunit naph/bph dioxygenase
155.Peripheral pathways for catabolism of aromatic compoundsBiphenyl DegradationLarge subunit naph/bph dioxygenase
156.Peripheral pathways for catabolism of aromatic compoundsBiphenyl DegradationDihydrodiol dehydrogenase (EC 1.3.1.56)
157.Peripheral pathways for catabolism of aromatic compoundsBiphenyl DegradationBiphenyl-2,3-diol 1,2-dioxygenase (EC 1.13.11.39)
158.Peripheral pathways for catabolism of aromatic compoundsBiphenyl DegradationBiphenyl dioxygenase alpha subunit (EC 1.14.12.18)
159.Peripheral pathways for catabolism of aromatic compoundsBiphenyl DegradationAcetaldehyde dehydrogenase, acetylating, (EC 1.2.1.10) in gene cluster for degradation of phenols, cresols, catechol
160.Peripheral pathways for catabolism of aromatic compoundsBenzoate catabolism3-Oxoadipate enol-lactonase (EC 3.1.1.24)