List of pathways, genes and/or enzymes identified for

"Xenobiotic Degradation"

Metagenome name: 6r_R2

Metagenome ID : mgm4709725.3

Crop: Sugarcane

S. No. Pathway Gene/Enzyme Name
1.1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation [PATH:ko00351]E1.2.-.-; [EC:1.2.-.-]
2.1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation [PATH:ko00351]E1.3.-.-; [EC:1.3.-.-]
3.Aminobenzoate degradation [PATH:ko00627]E1.14.13.40; anthraniloyl-CoA monooxygenase [EC:1.14.13.40]
4.Aminobenzoate degradation [PATH:ko00627]E3.1.3.41; 4-nitrophenyl phosphatase [EC:3.1.3.41]
5.Aminobenzoate degradation [PATH:ko00627]E4.1.1.61; 4-hydroxybenzoate decarboxylase [EC:4.1.1.61]
6.Aminobenzoate degradation [PATH:ko00627]E5.1.2.2; mandelate racemase [EC:5.1.2.2]
7.Aminobenzoate degradation [PATH:ko00627]abmG; 2-aminobenzoate-CoA ligase [EC:6.2.1.32]
8.Aminobenzoate degradation [PATH:ko00627]desB, galA; gallate dioxygenase [EC:1.13.11.57]
9.Aminobenzoate degradation [PATH:ko00627]mdlC; benzoylformate decarboxylase [EC:4.1.1.7]
10.Aminobenzoate degradation [PATH:ko00627]vanA; vanillate monooxygenase [EC:1.14.13.82]
11.Aminobenzoate degradation [PATH:ko00627]vanB; vanillate monooxygenase [EC:1.14.13.82]
12.Atrazine degradation [PATH:ko00791]E3.5.4.-; [EC:3.5.4.-]
13.Atrazine degradation [PATH:ko00791]atzB; hydroxyatrazine ethylaminohydrolase [EC:3.5.99.3]
14.Atrazine degradation [PATH:ko00791]atzD; cyanuric acid amidohydrolase [EC:3.5.2.15]
15.Benzoate degradation [PATH:ko00362]ligJ; 4-oxalmesaconate hydratase [EC:4.2.1.83]
16.Benzoate degradation [PATH:ko00362]ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
17.Benzoate degradation [PATH:ko00362]ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
18.Benzoate degradation [PATH:ko00362]ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
19.Benzoate degradation [PATH:ko00362]hbaD, hcrB; 4-hydroxybenzoyl-CoA reductase subunit beta [EC:1.3.7.9]
20.Benzoate degradation [PATH:ko00362]hbaC, hcrA; 4-hydroxybenzoyl-CoA reductase subunit alpha [EC:1.3.7.9]
21.Benzoate degradation [PATH:ko00362]hbaB, hcrC; 4-hydroxybenzoyl-CoA reductase subunit gamma [EC:1.3.7.9]
22.Benzoate degradation [PATH:ko00362]oah; 6-oxo-cyclohex-1-ene-carbonyl-CoA hydrolase [EC:3.7.1.-]
23.Benzoate degradation [PATH:ko00362]pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
24.Benzoate degradation [PATH:ko00362]pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
25.Benzoate degradation [PATH:ko00362]pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
26.Benzoate degradation [PATH:ko00362]pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
27.Benzoate degradation [PATH:ko00362]pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
28.Benzoate degradation [PATH:ko00362]pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
29.Benzoate degradation [PATH:ko00362]pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6]
30.Benzoate degradation [PATH:ko00362]pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6]
31.Benzoate degradation [PATH:ko00362]pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
32.Benzoate degradation [PATH:ko00362]hbaA; 4-hydroxybenzoate-CoA ligase [EC:6.2.1.27 6.2.1.25]
33.Benzoate degradation [PATH:ko00362]dch; cyclohexa-1,5-dienecarbonyl-CoA hydratase [EC:4.2.1.100]
34.Benzoate degradation [PATH:ko00362]badD; benzoyl-CoA reductase subunit [EC:1.3.7.8]
35.Benzoate degradation [PATH:ko00362]DHBD; 2,3-dihydroxybenzoate decarboxylase [EC:4.1.1.46]
36.Benzoate degradation [PATH:ko00362]E1.3.1.62; pimeloyl-CoA dehydrogenase [EC:1.3.1.62]
37.Benzoate degradation [PATH:ko00362]E4.1.1.77; 4-oxalocrotonate decarboxylase [EC:4.1.1.77]
38.Benzoate degradation [PATH:ko00362]E5.3.2.-; 4-oxalocrotonate tautomerase [EC:5.3.2.-]
39.Benzoate degradation [PATH:ko00362]aliA; cyclohexanecarboxylate-CoA ligase [EC:6.2.1.-]
40.Benzoate degradation [PATH:ko00362]aliB; cyclohexanecarboxyl-CoA dehydrogenase [EC:1.3.99.-]
41.Benzoate degradation [PATH:ko00362]badA; benzoate-CoA ligase [EC:6.2.1.25]
42.Benzoate degradation [PATH:ko00362]catC; muconolactone D-isomerase [EC:5.3.3.4]
43.Benzoate degradation [PATH:ko00362]benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
44.Benzoate degradation [PATH:ko00362]benC-xylZ; benzoate/toluate 1,2-dioxygenase electron transfer component
45.Benzoate degradation [PATH:ko00362]badI; 2-ketocyclohexanecarboxyl-CoA hydrolase [EC:3.1.2.-]
46.Benzoate degradation [PATH:ko00362]badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-]
47.Benzoate degradation [PATH:ko00362]badG; benzoyl-CoA reductase subunit [EC:1.3.7.8]
48.Benzoate degradation [PATH:ko00362]badF; benzoyl-CoA reductase subunit [EC:1.3.7.8]
49.Benzoate degradation [PATH:ko00362]badE; benzoyl-CoA reductase subunit [EC:1.3.7.8]
50.Bisphenol degradation [PATH:ko00363]E1.13.-.-; [EC:1.13.-.-]
51.Bisphenol degradation [PATH:ko00363]E1.13.11.41; 2,4'-dihydroxyacetophenone dioxygenase [EC:1.13.11.41]
52.Caprolactam degradation [PATH:ko00930]DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-]
53.Caprolactam degradation [PATH:ko00930]E1.14.13.22; cyclohexanone monooxygenase [EC:1.14.13.22]
54.Chloroalkane and chloroalkene degradation [PATH:ko00625]E3.8.1.-; [EC:3.8.1.-]
55.Chlorocyclohexane and chlorobenzene degradation [PATH:ko00361]E1.14.13.50; pentachlorophenol monooxygenase [EC:1.14.13.50]
56.Chlorocyclohexane and chlorobenzene degradation [PATH:ko00361]catB; muconate cycloisomerase [EC:5.5.1.1]
57.Chlorocyclohexane and chlorobenzene degradation [PATH:ko00361]bphC; biphenyl-2,3-diol 1,2-dioxygenase [EC:1.13.11.39]
58.Chlorocyclohexane and chlorobenzene degradation [PATH:ko00361]E3.8.1.3; haloacetate dehalogenase [EC:3.8.1.3]
59.Chlorocyclohexane and chlorobenzene degradation [PATH:ko00361]E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
60.Chlorocyclohexane and chlorobenzene degradation [PATH:ko00361]E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
61.Chlorocyclohexane and chlorobenzene degradation [PATH:ko00361]E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
62.Chlorocyclohexane and chlorobenzene degradation [PATH:ko00361]E1.14.13.7; phenol 2-monooxygenase [EC:1.14.13.7]
63.Chlorocyclohexane and chlorobenzene degradation [PATH:ko00361]E1.13.11.37; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]
64.Chlorocyclohexane and chlorobenzene degradation [PATH:ko00361]dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2]
65.Chlorocyclohexane and chlorobenzene degradation [PATH:ko00361]E1.14.12.-; [EC:1.14.12.-]
66.Chlorocyclohexane and chlorobenzene degradation [PATH:ko00361]tfdB; 2,4-dichlorophenol 6-monooxygenase [EC:1.14.13.20]
67.Chlorocyclohexane and chlorobenzene degradation [PATH:ko00361]catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
68.Dioxin degradation [PATH:ko00621]bphB; cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase [EC:1.3.1.56]
69.Dioxin degradation [PATH:ko00621]E1.14.13.1; salicylate hydroxylase [EC:1.14.13.1]
70.Drug metabolism - other enzymes [PATH:ko00983]CES1; carboxylesterase 1 [EC:3.1.1.1]
71.Drug metabolism - other enzymes [PATH:ko00983]CES2; carboxylesterase 2 [EC:3.1.1.1 3.1.1.84 3.1.1.56]
72.Drug metabolism - other enzymes [PATH:ko00983]E2.1.1.67, tpmT; thiopurine S-methyltransferase [EC:2.1.1.67]
73.Ethylbenzene degradation [PATH:ko00642]apc; acetophenone carboxylase [EC:6.4.1.8]
74.Fluorobenzoate degradation [PATH:ko00364]E1.14.12.13; 2-chlorobenzoate 1,2-dioxygenase [EC:1.14.12.13]
75.Nitrotoluene degradation [PATH:ko00633]nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
76.Nitrotoluene degradation [PATH:ko00633]E1.12.99.6S; hydrogenase small subunit [EC:1.12.99.6]
77.Nitrotoluene degradation [PATH:ko00633]E1.12.99.6L; hydrogenase large subunit [EC:1.12.99.6]
78.Polycyclic aromatic hydrocarbon degradation [PATH:ko00624]E1.14.12.7; phthalate 4,5-dioxygenase [EC:1.14.12.7]
79.Polycyclic aromatic hydrocarbon degradation [PATH:ko00624]E4.1.1.55; 4,5-dihydroxyphthalate decarboxylase [EC:4.1.1.55]
80.Polycyclic aromatic hydrocarbon degradation [PATH:ko00624]phdF; extradiol dioxygenase [EC:1.13.11.-]
81.Polycyclic aromatic hydrocarbon degradation [PATH:ko00624]phdI; 1-hydroxy-2-naphthoate dioxygenase [EC:1.13.11.38]
82.Steroid degradation [PATH:ko00984]E1.1.3.6; cholesterol oxidase [EC:1.1.3.6]
83.Styrene degradation [PATH:ko00643]E3.5.5.7; aliphatic nitrilase [EC:3.5.5.7]
84.Toluene degradation [PATH:ko00623]bbsE; benzylsuccinate CoA-transferase BbsE subunit [EC:2.8.3.15]
85.Toluene degradation [PATH:ko00623]bbsD; 2-[hydroxy(phenyl)methyl]-succinyl-CoA dehydrogenase BbsD subunit [EC:1.1.1.35]
86.Toluene degradation [PATH:ko00623]bbsC; 2-[hydroxy(phenyl)methyl]-succinyl-CoA dehydrogenase BbsC subunit [EC:1.1.1.35]
87.Toluene degradation [PATH:ko00623]E1.17.99.1; 4-cresol dehydrogenase (hydroxylating) [EC:1.17.99.1]
88.Xylene degradation [PATH:ko00622]xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
89.Xylene degradation [PATH:ko00622]cymC; p-cumic aldehyde dehydrogenase
90.Xylene degradation [PATH:ko00622]cymB; p-cumic alcohol dehydrogenase
91.Xylene degradation [PATH:ko00622]cmtAb; p-cumate 2,3-dioxygenase subunit alpha [EC:1.14.12.-]