List of genes/enzymes identified for carbazol degradation cluster in different metagenome datasets

 

S. No. Metagenome Name Metagenome Id (MG-RAST or EBI Metagenomics) Genes/Enzymes Identified
1.10LMmgm4478038.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
2.10LMmgm4478038.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
3.10LMmgm4478038.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
4.11LMmgm4478222.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
5.11LMmgm4478222.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
6.11LMmgm4478222.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
7.12LMmgm4478283.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
8.12LMmgm4478283.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
9.12LMmgm4478283.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
10.13LMmgm4478290.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
11.13LMmgm4478290.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
12.13LMmgm4478290.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
13.14LMmgm4478292.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
14.14LMmgm4478292.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
15.14LMmgm4478292.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
16.15LMmgm4478291.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
17.15LMmgm4478291.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
18.15LMmgm4478291.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
19.16LMmgm4478294.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
20.16LMmgm4478294.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
21.16LMmgm4478294.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
22.17LMmgm4478936.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
23.17LMmgm4478936.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
24.17LMmgm4478936.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
25.18LMmgm4478937.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
26.18LMmgm4478937.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
27.18LMmgm4478937.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
28.19LMmgm4478938.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
29.19LMmgm4478938.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
30.19LMmgm4478938.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
31.1b_R1mgm4709737.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
32.1b_R2mgm4709735.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
33.1LMmgm4477751.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
34.1LMmgm4477751.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
35.1LMmgm4477751.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
36.1r_R1mgm4709721.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
37.1r_R2mgm4709741.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
38.1r_R2mgm4709741.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
39.20LMmgm4478939.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
40.20LMmgm4478939.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
41.20LMmgm4478939.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
42.21LMmgm4479311.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
43.21LMmgm4479311.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
44.21LMmgm4479311.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
45.22LMmgm4478940.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
46.22LMmgm4478940.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
47.22LMmgm4478940.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
48.23LMmgm4478941.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
49.23LMmgm4478941.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
50.23LMmgm4478941.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
51.24LMmgm4478943.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
52.24LMmgm4478943.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
53.24LMmgm4478943.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
54.2b_R1mgm4709729.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
55.2b_R1mgm4709729.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
56.2b_R2mgm4709728.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
57.2b_R2mgm4709728.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
58.2LMmgm4477749.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
59.2LMmgm4477749.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
60.2LMmgm4477749.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
61.2r_R1mgm4709742.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
62.2r_R1mgm4709742.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
63.2r_R2mgm4709727.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
64.2r_R2mgm4709727.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
65.3b_R1mgm4709722.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
66.3b_R2mgm4709738.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
67.3b_R2mgm4709738.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
68.3LMmgm4477755.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
69.3LMmgm4477755.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
70.3r_R1mgm4709734.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
71.3r_R2mgm4709740.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
72.3r_R2mgm4709740.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
73.4b_R1mgm4709733.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
74.4b_R2mgm4709736.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
75.4LMmgm4477757.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
76.4LMmgm4477757.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
77.4r_R1mgm4709731.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
78.4r_R2mgm4709726.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
79.4r_R2mgm4709726.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
80.5b_R1mgm4709730.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
81.5b_R1mgm4709730.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
82.5b_R2mgm4709720.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
83.5LMmgm4477789.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
84.5LMmgm4477789.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
85.5r_R1mgm4709723.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
86.5r_R2mgm4709724.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
87.6b_R1mgm4709739.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
88.6b_R1mgm4709739.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
89.6b_R2mgm4709743.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
90.6b_R2mgm4709743.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
91.6LMmgm4477790.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
92.6LMmgm4477790.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
93.6r_R1mgm4709732.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
94.6r_R2mgm4709725.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
95.6r_R2mgm4709725.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
96.7LMmgm4478030.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
97.7LMmgm4478030.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
98.8LMmgm4478037.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
99.8LMmgm4478037.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
100.9LMmgm4478934.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
101.9LMmgm4478934.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
102.BulkAG1mgm4615280.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
103.BulkAG1mgm4615280.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
104.BulkAG2mgm4615281.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
105.BulkAG2mgm4615281.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
106.BulkAG3mgm4615282.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
107.BulkAG3mgm4615282.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
108.ERR566373ERS506647Terminal dioxygenase component of carbazole 1,9a-dioxygenase
109.ERR566373ERS5066472-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
110.ERR566374ERS5066482-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
111.ERR566374ERS506648Terminal dioxygenase component of carbazole 1,9a-dioxygenase
112.ERR566375ERS5066492-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
113.ERR566375ERS506649Terminal dioxygenase component of carbazole 1,9a-dioxygenase
114.ERR566376ERS506650Terminal dioxygenase component of carbazole 1,9a-dioxygenase
115.ERR566376ERS5066502-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
116.ERR566377ERS5066512-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
117.ERR566377ERS506651Terminal dioxygenase component of carbazole 1,9a-dioxygenase
118.ERR566378ERS5066522-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
119.ERR566378ERS506652Terminal dioxygenase component of carbazole 1,9a-dioxygenase
120.ERR566379ERS506653Terminal dioxygenase component of carbazole 1,9a-dioxygenase
121.ERR566379ERS5066532-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
122.ERR566380ERS5066542-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
123.ERR566380ERS506654Terminal dioxygenase component of carbazole 1,9a-dioxygenase
124.ERR566381ERS5066552-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
125.ERR566381ERS506655Terminal dioxygenase component of carbazole 1,9a-dioxygenase
126.ERR566382ERS506656Terminal dioxygenase component of carbazole 1,9a-dioxygenase
127.ERR566382ERS5066562-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
128.ERR566383ERS5066572-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
129.ERR566383ERS506657Terminal dioxygenase component of carbazole 1,9a-dioxygenase
130.ERR566384ERS506658Terminal dioxygenase component of carbazole 1,9a-dioxygenase
131.ERR566384ERS5066582-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
132.ERR566385ERS5066592-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
133.ERR566385ERS506659Terminal dioxygenase component of carbazole 1,9a-dioxygenase
134.ERR566386ERS5066602-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
135.ERR566386ERS506660Terminal dioxygenase component of carbazole 1,9a-dioxygenase
136.ERR566387ERS506661Terminal dioxygenase component of carbazole 1,9a-dioxygenase
137.ERR566387ERS5066612-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
138.Kodo rhizosphere metagenomemgm4776125.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
139.RAG10mgm4615275.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
140.RAG10mgm4615275.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
141.RAG11mgm4615276.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
142.RAG11mgm4615276.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
143.RAG12mgm4615277.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
144.RAG12mgm4615277.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
145.RAG5bmgm4620456.34-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
146.RAG5bmgm4620456.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
147.RAG6mgm4615270.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
148.RAG6mgm4615270.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
149.RAG7mgm4615272.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
150.RAG7mgm4615272.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
151.RAG8mgm4615273.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
152.RAG8mgm4615273.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
153.RAG9mgm4615274.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
154.RAG9mgm4615274.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
155.RTP1mgm4612674.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
156.RTP1mgm4612674.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
157.RTP10mgm4612902.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
158.RTP10mgm4612902.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
159.RTP2mgm4612675.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
160.RTP2mgm4612675.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
161.RTP3mgm4612676.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
162.RTP3mgm4612676.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
163.RTP4mgm4612677.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
164.RTP4mgm4612677.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
165.RTP5mgm4612679.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
166.RTP5mgm4612679.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
167.RTP6mgm4612898.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
168.RTP6mgm4612898.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
169.RTP7mgm4612899.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
170.RTP7mgm4612899.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
171.RTP8mgm4612900.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
172.RTP8mgm4612900.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase
173.RTP9mgm4612901.32-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
174.RTP9mgm4612901.3Terminal dioxygenase component of carbazole 1,9a-dioxygenase