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M-83 SNPs

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Total record count: 7933.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_2796 2349 C A 33 60.77 noncoding Transversion 0/1 Unannotated
Scaffold_2797 30667 T A 75 558.77 exon Transversion 0/1 Unannotated
Scaffold_2801 1624 T A 10 35.77 exon Transversion 0/1 Unannotated
Scaffold_2801 2501 A T 21 523.96 exon Transversion 1/1 Unannotated
Scaffold_2805 25269 A T 250 1033.77 CDS Transversion 0/1 Unannotated
Scaffold_2808 39515 T A 53 1479.77 intron Transversion 0/1 Unannotated
Scaffold_2809 6234 T G 14 118.77 CDS Transversion 0/1 Unannotated
Scaffold_2811 8371 A C 12 81.77 exon Transversion 0/1 Unannotated
Scaffold_2811 8954 A C 11 64.77 exon Transversion 0/1 Unannotated
Scaffold_2811 9046 T A 36 737.77 exon Transversion 0/1 Unannotated
Scaffold_2811 9460 T G 40 425.77 CDS Transversion 0/1 Unannotated
Scaffold_2811 9628 A T 65 354.77 exon Transversion 0/1 Unannotated
Scaffold_2812 58876 T A 61 1810.77 exon Transversion 1/1 Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (A... more
Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_2812 58896 G T 62 1771.77 exon Transversion 1/1 Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (A... more
Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_2812 59149 T A 31 791.1 exon Transversion 0/1 Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (A... more
Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_2812 77105 C G 16 437.1 intron Transversion 1/1 50S ribosomal protein L2-B, chloroplastic
Scaffold_2815 5495 G T 61 1161.77 intron Transversion 0/1 Probable inactive dual specificity protein phosphatase-like At4g18593
Scaffold_2815 5523 T G 25 486.77 intron Transversion 0/1 Unannotated
Scaffold_2817 11325 T G 15 34.77 noncoding Transversion 0/1 Unannotated
Scaffold_2817 11326 C A 15 43.77 noncoding Transversion 0/1 Unannotated

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