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M-83 SNPs

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Total record count: 7933.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_2934 39078 C A 43 470.77 noncoding Transversion 0/1 Unannotated
Scaffold_2938 41707 G C 28 74.77 intron Transversion 0/1 Unannotated
Scaffold_2942 25492 C G 12 224.77 exon Transversion 0/1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Prot... more
Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_2943 12978 T A 250 8964.77 intron Transversion 1/1 Unannotated
Scaffold_2945 6264 G C 94 186.77 intron Transversion 0/1 Unannotated
Scaffold_2953 5701 C A 91 3302.77 noncoding Transversion 1/1 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic (EC 7.1.1.-) (NAD(P)H... more
NAD(P)H-quinone oxidoreductase chain 4, chloroplastic (EC 7.1.1.-) (NAD(P)H dehydrogenase, chain 4) (NADH-plastoquinone oxidoreductase chain 4)
Scaffold_2953 22199 A C 11 55.77 exon Transversion 0/1 Unannotated
Scaffold_2962 9401 T A 250 8602.77 noncoding Transversion 1/1 Unannotated
Scaffold_2962 9408 A T 250 54.77 noncoding Transversion 0/1 Unannotated
Scaffold_2963 2192 T G 38 1186.77 exon Transversion 1/1 Unannotated
Scaffold_2963 17596 G T 247 295.77 noncoding Transversion 0/1 Unannotated
Scaffold_2971 8042 T G 151 52.74 intron Transversion 1/1 Unannotated
Scaffold_2971 36778 G C 35 433.77 intron Transversion 0/1 ATP-dependent zinc metalloprotease FTSH 2, chloroplastic (OsFTSH2) (EC 3.4.... more
ATP-dependent zinc metalloprotease FTSH 2, chloroplastic (OsFTSH2) (EC 3.4.24.-)
Scaffold_2976 49730 C A 24 176.77 noncoding Transversion 0/1 Unannotated
Scaffold_2993 24174 A T 250 372.77 noncoding Transversion 0/1 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidas... more
ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp)
Scaffold_2993 24175 T A 250 705.77 noncoding Transversion 0/1 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidas... more
ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp)
Scaffold_3008 33842 T A 10 212.8 exon Transversion 0/1 Unannotated
Scaffold_3008 33843 A C 24 519.77 exon Transversion 0/1 Unannotated
Scaffold_3010 49640 A C 250 73.77 noncoding Transversion 0/1 Unannotated
Scaffold_3010 49643 G T 250 32.77 noncoding Transversion 0/1 Unannotated

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