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M-83 SNPs

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Total record count: 7933.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_3789 22629 G T 26 60.77 CDS Transversion 0/1 Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (A... more
Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_3791 8607 A T 248 816.77 noncoding Transversion 0/1 Unannotated
Scaffold_3791 8618 A T 249 67.77 noncoding Transversion 0/1 Unannotated
Scaffold_3797 27098 A C 14 205.77 noncoding Transversion 0/1 Unannotated
Scaffold_3798 6135 A C 44 1067.77 CDS Transversion 0/1 12-oxophytodienoate reductase 3 (EC 1.3.1.42) (12-oxophytodienoate-10,11-re... more
12-oxophytodienoate reductase 3 (EC 1.3.1.42) (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (LeOPR3)
Scaffold_3798 6181 A T 46 94.77 CDS Transversion 0/1 12-oxophytodienoate reductase 3 (EC 1.3.1.42) (12-oxophytodienoate-10,11-re... more
12-oxophytodienoate reductase 3 (EC 1.3.1.42) (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (LeOPR3)
Scaffold_3798 6219 A T 26 616.77 CDS Transversion 0/1 12-oxophytodienoate reductase 3 (EC 1.3.1.42) (12-oxophytodienoate-10,11-re... more
12-oxophytodienoate reductase 3 (EC 1.3.1.42) (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (LeOPR3)
Scaffold_3798 6321 A C 24 246.77 CDS Transversion 0/1 12-oxophytodienoate reductase 3 (EC 1.3.1.42) (12-oxophytodienoate-10,11-re... more
12-oxophytodienoate reductase 3 (EC 1.3.1.42) (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (LeOPR3)
Scaffold_3798 6397 C G 15 140.77 intron Transversion 0/1 12-oxophytodienoate reductase 3 (EC 1.3.1.42) (12-oxophytodienoate-10,11-re... more
12-oxophytodienoate reductase 3 (EC 1.3.1.42) (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (LeOPR3)
Scaffold_3801 725 T A 11 30.77 intron Transversion 0/1 Unannotated
Scaffold_3801 8058 G T 249 43.77 noncoding Transversion 0/1 Unannotated
Scaffold_3803 20606 T A 80 80.77 noncoding Transversion 0/1 Unannotated
Scaffold_3803 20645 G C 81 614.77 noncoding Transversion 0/1 Unannotated
Scaffold_3803 20686 T A 33 269.77 noncoding Transversion 0/1 Unannotated
Scaffold_3806 3894 G T 15 30.77 intron Transversion 0/1 Unannotated
Scaffold_3806 44115 T G 250 8549.77 noncoding Transversion 1/1 Unannotated
Scaffold_3806 44286 A C 14 138.79 noncoding Transversion 0/1 Unannotated
Scaffold_3810 783 G C 64 430.77 CDS Transversion 0/1 Unannotated
Scaffold_3810 847 A T 23 379.77 CDS Transversion 0/1 Unannotated
Scaffold_3813 54226 C G 114 4233.77 noncoding Transversion 1/1 Protein TIC 214 (Translocon at the inner envelope membrane of chloroplasts ... more
Protein TIC 214 (Translocon at the inner envelope membrane of chloroplasts 214) (AtTIC214)

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