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M-83 SNPs

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Total record count: 7933.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_327 49676 T C 10 61.77 CDS Transition 0/1 Unannotated
Scaffold_335 43256 T C 85 2674.77 noncoding Transition 0/1 Cellulose synthase A catalytic subunit 1 [UDP-forming] (AtCesA1) (EC 2.4.1.... more
Cellulose synthase A catalytic subunit 1 [UDP-forming] (AtCesA1) (EC 2.4.1.12) (Protein RADIALLY SWOLLEN 1) (AtRSW1)
Scaffold_335 43259 G A 85 2649.77 noncoding Transition 0/1 Cellulose synthase A catalytic subunit 1 [UDP-forming] (AtCesA1) (EC 2.4.1.... more
Cellulose synthase A catalytic subunit 1 [UDP-forming] (AtCesA1) (EC 2.4.1.12) (Protein RADIALLY SWOLLEN 1) (AtRSW1)
Scaffold_339 74236 T C 21 37.77 CDS Transition 0/1 Unannotated
Scaffold_343 65282 T C 13 32.77 CDS Transition 0/1 3-dehydroquinate synthase, chloroplastic (EC 4.2.3.4)
Scaffold_343 80158 A G 43 66.77 exon Transition 0/1 Unannotated
Scaffold_345 53717 G A 21 424.77 exon Transition 0/1 Unannotated
Scaffold_349 6881 G A 12 61.77 CDS Transition 0/1 Protein TOC75-3, chloroplastic (75 kDa translocon at the outer-envelope-mem... more
Protein TOC75-3, chloroplastic (75 kDa translocon at the outer-envelope-membrane of chloroplasts 3) (AtTOC75-III)
Scaffold_355 73872 G A 117 3132.77 exon Transition 1/1 Polyubiquitin [Cleaved into: Ubiquitin]
Scaffold_364 64522 T C 11 58.77 exon Transition 0/1 Unannotated
Scaffold_370 4865 A G 11 58.77 exon Transition 0/1 Zinc finger protein ZAT4
Scaffold_374 49303 T C 32 56.77 CDS Transition 0/1 Unannotated
Scaffold_376 63315 C T 116 1250.77 noncoding Transition 0/1 Unannotated
Scaffold_378 52225 C T 80 204.77 intron Transition 0/1 Calmodulin-1 (CaM-1)
Scaffold_390 13986 A G 20 37.77 exon Transition 0/1 Unannotated
Scaffold_392 34895 T C 13 52.77 exon Transition 0/1 Pheophytinase, chloroplastic (EC 3.1.1.-) (Pheophytin pheophorbide hydrolas... more
Pheophytinase, chloroplastic (EC 3.1.1.-) (Pheophytin pheophorbide hydrolase) (Protein CO-REGULATED WITH NYE1)
Scaffold_392 55883 G A 23 31.77 exon Transition 0/1 Eukaryotic peptide chain release factor subunit 1-3 (Eukaryotic release fac... more
Eukaryotic peptide chain release factor subunit 1-3 (Eukaryotic release factor 1-3) (eRF1-3) (Omnipotent suppressor protein 1 homolog 3) (SUP1 homolog 3)
Scaffold_414 35077 T C 10 243.84 noncoding Transition 0/1 Unannotated
Scaffold_417 14408 C T 12 36.77 CDS Transition 0/1 Benzyl alcohol O-benzoyltransferase (EC 2.3.1.196) (Benzoyl coenzyme A:benz... more
Benzyl alcohol O-benzoyltransferase (EC 2.3.1.196) (Benzoyl coenzyme A:benzyl alcohol benzoyl transferase)
Scaffold_420 9337 G A 30 44.77 exon Transition 0/1 Mitogen-activated protein kinase kinase kinase ANP1 (EC 2.7.11.25) (Arabido... more
Mitogen-activated protein kinase kinase kinase ANP1 (EC 2.7.11.25) (Arabidopsis NPK1-related kinase 1)

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