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M-83 SNPs

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Total record count: 7933.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_2905 45359 T C 250 971.77 noncoding Transition 0/1 Photosystem II reaction center protein M (PSII-M)
Scaffold_2905 45432 A G 250 477.77 noncoding Transition 0/1 Unannotated
Scaffold_2905 45491 T C 248 658.77 noncoding Transition 0/1 Unannotated
Scaffold_2905 45492 T C 248 334.77 noncoding Transition 0/1 Unannotated
Scaffold_2905 45493 A G 250 505.77 noncoding Transition 0/1 Unannotated
Scaffold_2910 21964 A G 17 55.77 exon Transition 0/1 Unannotated
Scaffold_2912 68772 T C 15 143.77 exon Transition 0/1 Unannotated
Scaffold_2912 68783 C T 15 75.77 exon Transition 0/1 Unannotated
Scaffold_2916 3984 A G 13 89.77 intron Transition 0/1 Unannotated
Scaffold_2916 13985 C T 17 58.77 exon Transition 0/1 Unannotated
Scaffold_2917 48469 C T 50 1265.77 noncoding Transition 1/1 Photosystem II CP47 reaction center protein (PSII 47 kDa protein) (Protein ... more
Photosystem II CP47 reaction center protein (PSII 47 kDa protein) (Protein CP-47)
Scaffold_2920 35608 G A 12 104.78 CDS Transition 0/1 Unannotated
Scaffold_2921 42872 T C 26 642.9 CDS Transition 1/1 Retrovirus-related Pol polyprotein from transposon RE2 (Retro element 2) (A... more
Retrovirus-related Pol polyprotein from transposon RE2 (Retro element 2) (AtRE2) [Includes: Protease RE2 (EC 3.4.23.-); Reverse transcriptase RE2 (EC 2.7.7.49); Endonuclease RE2]
Scaffold_2921 42946 A G 12 221.77 CDS Transition 0/1 Retrovirus-related Pol polyprotein from transposon RE2 (Retro element 2) (A... more
Retrovirus-related Pol polyprotein from transposon RE2 (Retro element 2) (AtRE2) [Includes: Protease RE2 (EC 3.4.23.-); Reverse transcriptase RE2 (EC 2.7.7.49); Endonuclease RE2]
Scaffold_2922 31219 G A 24 49.74 noncoding Transition 1/1 Unannotated
Scaffold_2922 47029 T C 10 61.77 CDS Transition 0/1 Unannotated
Scaffold_2922 48176 C T 74 996.77 CDS Transition 0/1 Unannotated
Scaffold_2923 7855 C T 20 66.77 exon Transition 0/1 Unannotated
Scaffold_2928 31678 A G 12 237.77 CDS Transition 0/1 Unannotated
Scaffold_2929 44673 T C 36 62.77 noncoding Transition 0/1 Unannotated

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