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M-83 SNPs

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Total record count: 7933.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_3112 20880 A G 250 326.77 noncoding Transition 0/1 Unannotated
Scaffold_3113 46720 G A 14 242.77 exon Transition 0/1 Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (A... more
Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_3115 11236 G A 12 121.77 exon Transition 0/1 Unannotated
Scaffold_3115 11652 A G 20 521.77 exon Transition 0/1 Unannotated
Scaffold_3115 11687 C T 31 632.77 exon Transition 0/1 Unannotated
Scaffold_3115 11718 C T 49 133.77 exon Transition 0/1 Unannotated
Scaffold_3115 11916 C T 19 95.77 exon Transition 0/1 Unannotated
Scaffold_3115 12343 T C 10 232.8 exon Transition 0/1 Unannotated
Scaffold_3115 13037 C T 39 122.77 exon Transition 0/1 RNA-directed DNA polymerase homolog (EC 2.7.7.48) (Reverse transcriptase ho... more
RNA-directed DNA polymerase homolog (EC 2.7.7.48) (Reverse transcriptase homolog)
Scaffold_3115 13078 A G 38 124.77 exon Transition 0/1 RNA-directed DNA polymerase homolog (EC 2.7.7.48) (Reverse transcriptase ho... more
RNA-directed DNA polymerase homolog (EC 2.7.7.48) (Reverse transcriptase homolog)
Scaffold_3115 14425 C T 14 110.77 exon Transition 0/1 Unannotated
Scaffold_3115 22839 A G 250 4673.77 noncoding Transition 0/1 Cytochrome b6
Scaffold_3115 22846 C T 250 975.77 noncoding Transition 0/1 Cytochrome b6
Scaffold_3115 23056 C T 10 83.77 noncoding Transition 0/1 Cytochrome b6
Scaffold_3117 26324 C T 101 78.77 intron Transition 0/1 Unannotated
Scaffold_3117 28343 C T 179 2569.77 CDS Transition 0/1 Unannotated
Scaffold_3117 28364 C T 123 454.77 CDS Transition 0/1 Unannotated
Scaffold_3117 29012 C T 200 3132.77 intron Transition 0/1 Unannotated
Scaffold_3117 29087 C T 249 3552.77 CDS Transition 0/1 Uncharacterized mitochondrial protein ymf40 (ORF502)
Scaffold_3117 29151 C T 250 259.77 CDS Transition 0/1 Uncharacterized mitochondrial protein ymf40 (ORF502)

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