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M-83 SNPs

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Total record count: 7933.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_3928 29956 A G 25 197.77 noncoding Transition 0/1 Unannotated
Scaffold_3929 48718 A G 59 1580.77 noncoding Transition 0/1 Unannotated
Scaffold_3929 48721 G A 248 7771.77 noncoding Transition 1/1 Unannotated
Scaffold_3929 48723 T C 250 174.77 noncoding Transition 0/1 Unannotated
Scaffold_3929 48732 T C 250 216.77 noncoding Transition 0/1 Unannotated
Scaffold_3931 1753 A G 15 330.77 noncoding Transition 0/1 Unannotated
Scaffold_3931 1754 C T 15 327.77 noncoding Transition 0/1 Unannotated
Scaffold_3931 1855 A G 23 659.84 noncoding Transition 1/1 Unannotated
Scaffold_3934 11374 A G 10 66.77 exon Transition 0/1 Unannotated
Scaffold_3934 11782 T C 58 837.77 CDS Transition 0/1 Unannotated
Scaffold_3934 11788 T C 82 1742.77 CDS Transition 0/1 Unannotated
Scaffold_3934 11907 A G 200 5848.77 CDS Transition 1/1 Unannotated
Scaffold_3934 12149 T C 85 2456.77 CDS Transition 1/1 Unannotated
Scaffold_3934 12158 G A 83 264.77 CDS Transition 0/1 Unannotated
Scaffold_3934 12228 A G 15 335.77 CDS Transition 0/1 Unannotated
Scaffold_3934 42543 C T 250 7947.77 intron Transition 1/1 Unannotated
Scaffold_3934 42755 C T 249 926.77 exon Transition 0/1 Unannotated
Scaffold_3937 15907 C T 17 52.77 exon Transition 0/1 Serine/threonine-protein phosphatase PP1 isozyme 4 (EC 3.1.3.16) (Type one ... more
Serine/threonine-protein phosphatase PP1 isozyme 4 (EC 3.1.3.16) (Type one protein phosphatase 4)
Scaffold_3942 6725 C T 171 334.77 noncoding Transition 0/1 Unannotated
Scaffold_3942 33804 C T 16 168.77 CDS Transition 0/1 Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (A... more
Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]

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