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M-83 SNPs

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Total record count: 7933.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_180 498394 T A 33 62.77 exon Transversion 0/1 Unannotated
Scaffold_180 498845 A T 21 46.77 exon Transversion 0/1 Unannotated
Scaffold_180 514346 G T 18 43.77 intron Transversion 0/1 Notchless protein homolog
Scaffold_181 425676 A T 21 564.94 CDS Transversion 0/1 Calcium-dependent protein kinase 1 (OsCDPK1) (OsCPK1) (EC 2.7.11.1)
Scaffold_181 481087 C A 35 81.77 exon Transversion 0/1 Probable isoaspartyl peptidase/L-asparaginase 2 (EC 3.4.19.5) (L-asparagine... more
Probable isoaspartyl peptidase/L-asparaginase 2 (EC 3.4.19.5) (L-asparagine amidohydrolase 2) [Cleaved into: Isoaspartyl peptidase/L-asparaginase 2 subunit alpha; Isoaspartyl peptidase/L-asparaginase 2 subunit beta]
Scaffold_181 481088 C G 32 84.77 exon Transversion 0/1 Probable isoaspartyl peptidase/L-asparaginase 2 (EC 3.4.19.5) (L-asparagine... more
Probable isoaspartyl peptidase/L-asparaginase 2 (EC 3.4.19.5) (L-asparagine amidohydrolase 2) [Cleaved into: Isoaspartyl peptidase/L-asparaginase 2 subunit alpha; Isoaspartyl peptidase/L-asparaginase 2 subunit beta]
Scaffold_181 584537 A T 10 187.77 noncoding Transversion 0/1 Unannotated
Scaffold_181 677065 G C 20 86.77 CDS Transversion 0/1 Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein... more
Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
Scaffold_181 677066 A T 20 89.77 CDS Transversion 0/1 Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein... more
Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
Scaffold_181 677166 C G 37 65.77 CDS Transversion 0/1 Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein... more
Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
Scaffold_181 691826 A T 18 52.77 CDS Transversion 0/1 Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein... more
Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
Scaffold_181 718364 C A 18 40.77 exon Transversion 0/1 Unannotated
Scaffold_181 849701 T A 22 65.77 CDS Transversion 0/1 DNA-directed RNA polymerase II subunit 2 (DNA-directed RNA polymerase II 13... more
DNA-directed RNA polymerase II subunit 2 (DNA-directed RNA polymerase II 135 kDa polypeptide) (DNA-directed RNA polymerase II subunit RPB2) (RNA polymerase II subunit 2) (RNA polymerase II subunit B2) (EC 2.7.7.6) (Protein EMBRYO DEFECTIVE 1989)
Scaffold_182 7234 T A 10 30.77 CDS Transversion 0/1 Unannotated
Scaffold_182 7235 C G 10 30.77 exon Transversion 0/1 Unannotated
Scaffold_188 27218 A C 53 54.77 exon Transversion 0/1 Fatty acid hydroperoxide lyase, chloroplastic (LeHPL) (EC 4.2.99.-) (Cytoch... more
Fatty acid hydroperoxide lyase, chloroplastic (LeHPL) (EC 4.2.99.-) (Cytochrome P450 74B)
Scaffold_192 33799 C A 14 55.77 intron Transversion 0/1 Unannotated
Scaffold_192 33801 C G 23 361.77 intron Transversion 0/1 Unannotated
Scaffold_192 73410 A C 11 61.77 intron Transversion 0/1 Unannotated
Scaffold_196 11773 A T 11 39.77 exon Transversion 0/1 GDSL esterase/lipase CPRD49 (EC 3.1.1.-) (Extracellular lipase CPRD49)

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