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M-83 SNPs

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Total record count: 7933.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_496 26467 G T 38 583.77 noncoding Transversion 0/1 Unannotated
Scaffold_501 53062 G C 55 1177.77 intron Transversion 1/1 Unannotated
Scaffold_505 40850 G T 15 185.77 exon Transversion 0/1 Unannotated
Scaffold_505 40855 G C 16 185.77 exon Transversion 0/1 Unannotated
Scaffold_512 47967 G C 10 101.77 exon Transversion 0/1 Unannotated
Scaffold_513 21400 A T 15 69.77 CDS Transversion 0/1 Unannotated
Scaffold_523 28467 G T 18 55.77 exon Transversion 0/1 Calcium-transporting ATPase 4, plasma membrane-type (EC 7.2.2.10) (Ca(2+)-A... more
Calcium-transporting ATPase 4, plasma membrane-type (EC 7.2.2.10) (Ca(2+)-ATPase isoform 4)
Scaffold_523 49330 C A 237 492.77 CDS Transversion 0/1 Calnexin homolog
Scaffold_525 64292 C G 15 353.28 intron Transversion 0/1 Unannotated
Scaffold_526 6444 C G 31 169.77 noncoding Transversion 0/1 Unannotated
Scaffold_535 47115 A T 15 86.77 CDS Transversion 0/1 Unannotated
Scaffold_537 6293 C G 10 30.77 exon Transversion 0/1 Unannotated
Scaffold_537 31834 C A 34 133.77 CDS Transversion 0/1 Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic (AtCPP1) (Protein CEL... more
Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic (AtCPP1) (Protein CELL GROWTH DEFECT FACTOR 1) (AtCDF1)
Scaffold_538 31494 A C 19 46.77 CDS Transversion 0/1 Unannotated
Scaffold_538 62558 G C 23 743.78 exon Transversion 1/1 Unannotated
Scaffold_538 62559 A C 40 479.77 exon Transversion 0/1 Unannotated
Scaffold_541 2574 T G 13 52.77 intron Transversion 0/1 Unannotated
Scaffold_553 33456 T A 17 484.77 noncoding Transversion 0/1 Unannotated
Scaffold_564 52268 T G 15 268.77 exon Transversion 0/1 Pectinesterase/pectinesterase inhibitor PPE8B [Includes: Pectinesterase inh... more
Pectinesterase/pectinesterase inhibitor PPE8B [Includes: Pectinesterase inhibitor PPE8B (Pectin methylesterase inhibitor PPE8B); Pectinesterase PPE8B (PE PPE8B) (EC 3.1.1.11) (Pectin methylesterase PPE8B)]
Scaffold_566 937 A T 22 31.77 CDS Transversion 0/1 Unannotated

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