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  3. RGC-1066 SNPs

RGC-1066 SNPs

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Total record count: 10279.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_144 447290 T C 33 792.77 CDS Transition 1/1 Glycosyltransferase family protein 64 protein C5 (GT64 C5) (EC 2.4.1.-)
Scaffold_2737 1796 T C 23 40.77 CDS Transition 0/1 GPN-loop GTPase QQT2 (EC 3.6.5.-) (Protein QUATRE QUART 2)
Scaffold_2737 1817 C T 34 151.77 CDS Transition 0/1 GPN-loop GTPase QQT2 (EC 3.6.5.-) (Protein QUATRE QUART 2)
Scaffold_2737 1904 C T 49 656.77 CDS Transition 0/1 GPN-loop GTPase QQT2 (EC 3.6.5.-) (Protein QUATRE QUART 2)
Scaffold_2737 2102 C T 41 389.77 CDS Transition 0/1 GPN-loop GTPase QQT2 (EC 3.6.5.-) (Protein QUATRE QUART 2)
Scaffold_2737 2111 G A 38 388.77 CDS Transition 0/1 GPN-loop GTPase QQT2 (EC 3.6.5.-) (Protein QUATRE QUART 2)
Scaffold_48 681453 G A 17 61.77 CDS Transition 0/1 G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 (EC... more
G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 (EC 2.7.11.1)
Scaffold_27 1692626 G A 20 43.77 CDS Transition 0/1 G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 (OsLec... more
G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 (OsLecRK3) (EC 2.7.11.1) (OsRLCK135)
Scaffold_27 1692791 A G 39 1087.77 CDS Transition 1/1 G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 (OsLec... more
G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 (OsLecRK3) (EC 2.7.11.1) (OsRLCK135)
Scaffold_33 897955 C T 13 32.77 exon Transition 0/1 Heat shock 70 kDa protein 17 (Heat shock protein 70-17) (AtHsp70-17)
Scaffold_3039 53962 G A 71 309.77 CDS Transition 0/1 Heat shock 70 kDa protein 17 (Heat shock protein 70-17) (AtHsp70-17)
Scaffold_3039 54028 C T 98 1962.77 CDS Transition 0/1 Heat shock 70 kDa protein 17 (Heat shock protein 70-17) (AtHsp70-17)
Scaffold_3039 54057 G A 52 75.77 CDS Transition 0/1 Heat shock 70 kDa protein 17 (Heat shock protein 70-17) (AtHsp70-17)
Scaffold_3039 54066 A G 35 33.77 CDS Transition 0/1 Heat shock 70 kDa protein 17 (Heat shock protein 70-17) (AtHsp70-17)
Scaffold_3039 54818 A G 29 1000.77 CDS Transition 1/1 Heat shock 70 kDa protein 17 (Heat shock protein 70-17) (AtHsp70-17)
Scaffold_3039 54825 T C 40 1467.77 CDS Transition 1/1 Heat shock 70 kDa protein 17 (Heat shock protein 70-17) (AtHsp70-17)
Scaffold_3039 54884 C T 144 377.77 CDS Transition 0/1 Heat shock 70 kDa protein 17 (Heat shock protein 70-17) (AtHsp70-17)
Scaffold_3039 54959 T A,G 108 1597.77 intron Transition 1/2 Heat shock 70 kDa protein 17 (Heat shock protein 70-17) (AtHsp70-17)
Scaffold_3039 54973 A G 48 1162.77 intron Transition 0/1 Heat shock 70 kDa protein 17 (Heat shock protein 70-17) (AtHsp70-17)
Scaffold_3039 55501 C T 81 1958.77 CDS Transition 0/1 Heat shock 70 kDa protein 17 (Heat shock protein 70-17) (AtHsp70-17)

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