RGC-1066 SNPs

	SNP Id	Position	Reference Allele	Alternate Allele	DP	Quality	Located At	Type	Genotype	Function
	Scaffold_18	948099	T	G	20	730.77	exon	Transversion	1/1	Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (A... more Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
	Scaffold_18	1228660	T	G	12	367.77	exon	Transversion	1/1	Unannotated
	Scaffold_18	2277616	G	T	17	432.77	CDS	Transversion	1/1	F-box/kelch-repeat protein At1g67480
	Scaffold_18	2339887	G	C	53	852.77	CDS	Transversion	0/1	Unannotated
	Scaffold_18	2340320	C	G	11	294.78	CDS	Transversion	1/1	Unannotated
	Scaffold_18	2602018	G	T	10	272.18	intron	Transversion	0/1	Unannotated
	Scaffold_19	138412	G	C	123	2490.77	CDS	Transversion	0/1	Unannotated
	Scaffold_19	203095	T	A	23	645.77	CDS	Transversion	1/1	Unannotated
	Scaffold_19	488534	A	T	15	52.77	intron	Transversion	0/1	Unannotated
	Scaffold_19	526167	A	C	10	347.77	intron	Transversion	1/1	Unannotated
	Scaffold_19	857535	T	G	20	634.77	noncoding	Transversion	1/1	Unannotated
	Scaffold_19	1314779	T	G	15	243.77	exon	Transversion	0/1	Unannotated
	Scaffold_19	1416793	T	A	44	1279.77	exon	Transversion	1/1	Unannotated
	Scaffold_19	1534051	T	A	17	284.77	noncoding	Transversion	0/1	Unannotated
	Scaffold_19	1594348	T	A	19	503.77	CDS	Transversion	1/1	Unannotated
	Scaffold_19	1628295	C	A	56	1743.77	CDS	Transversion	1/1	Sucrose transport protein (Sucrose permease) (Sucrose-proton symporter)
	Scaffold_19	1700766	C	A	10	330.78	CDS	Transversion	1/1	Unannotated
	Scaffold_19	2084335	C	A	55	1942.77	CDS	Transversion	1/1	Unannotated
	Scaffold_19	2084340	G	T	16	536.77	CDS	Transversion	1/1	Unannotated
	Scaffold_20	92372	C	G	14	81.77	exon	Transversion	0/1	Unannotated
There are no records to display