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RGC-1066 SNPs

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Total record count: 10279.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_335 52703 G C 23 221.77 exon Transversion 0/1 Unannotated
Scaffold_335 52814 T A 12 95.77 exon Transversion 0/1 Unannotated
Scaffold_337 30871 C G 31 977.77 intron Transversion 1/1 Unannotated
Scaffold_337 32872 A T 15 42.77 intron Transversion 0/1 Unannotated
Scaffold_338 51799 C A 13 467.77 exon Transversion 1/1 Probable zinc metalloprotease EGY2, chloroplastic (EC 3.4.24.-) (Protein ET... more
Probable zinc metalloprotease EGY2, chloroplastic (EC 3.4.24.-) (Protein ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN 2)
Scaffold_341 30426 A T 17 156.77 exon Transversion 0/1 Unannotated
Scaffold_343 65268 T G 34 1183.77 CDS Transversion 1/1 3-dehydroquinate synthase, chloroplastic (EC 4.2.3.4)
Scaffold_343 79717 A T 48 947.77 noncoding Transversion 0/1 Unannotated
Scaffold_343 79740 G T 44 202.77 noncoding Transversion 0/1 Unannotated
Scaffold_343 79756 A T 47 240.77 noncoding Transversion 0/1 Unannotated
Scaffold_347 69274 A C 15 49.77 exon Transversion 0/1 Unannotated
Scaffold_349 36658 G C 19 308.77 exon Transversion 0/1 Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyropho... more
Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase)
Scaffold_349 36673 C A 11 51.77 exon Transversion 0/1 Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyropho... more
Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase)
Scaffold_350 68645 T G 27 59.77 noncoding Transversion 0/1 Unannotated
Scaffold_350 68646 A T 31 115.77 noncoding Transversion 0/1 Unannotated
Scaffold_359 5158 C A 48 1294.77 CDS Transversion 1/1 Polyadenylate-binding protein RBP47B' (Poly(A)-binding protein RBP47B') (RN... more
Polyadenylate-binding protein RBP47B' (Poly(A)-binding protein RBP47B') (RNA-binding protein 47B') (AtRBP47B prime) (AtRBP47B')
Scaffold_367 15663 C A 135 3575.77 exon Transversion 1/1 Unannotated
Scaffold_376 63370 C G 20 40.77 noncoding Transversion 0/1 Unannotated
Scaffold_378 15743 G T 14 259.77 noncoding Transversion 0/1 Unannotated
Scaffold_378 15833 C G 23 299.77 noncoding Transversion 0/1 Unannotated

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