RGC-1066 SNPs

	SNP Id	Position	Reference Allele	Alternate Allele	DP	Quality	Located At	Type	Genotype	Function
	Scaffold_3064	55165	G	T	250	9273.77	CDS	Transversion	1/1	Unannotated
	Scaffold_3064	55220	C	G	250	1143.77	CDS	Transversion	0/1	Unannotated
	Scaffold_3064	55292	A	T	157	5453.77	CDS	Transversion	1/1	Unannotated
	Scaffold_3064	55393	A	C	115	983.77	intron	Transversion	0/1	Unannotated
	Scaffold_3064	55506	T	A	14	343.28	intron	Transversion	0/1	Unannotated
	Scaffold_3064	55656	A	C	14	141.77	CDS	Transversion	0/1	Unannotated
	Scaffold_3065	44754	T	G	10	308.77	exon	Transversion	1/1	Unannotated
	Scaffold_3065	44978	T	A	88	2858.77	exon	Transversion	1/1	Unannotated
	Scaffold_3065	45051	T	G	38	1297.77	intron	Transversion	1/1	Unannotated
	Scaffold_3065	45099	A	C	34	1167.77	CDS	Transversion	1/1	Unannotated
	Scaffold_3065	46958	A	T	250	431.77	noncoding	Transversion	0/1	Unannotated
	Scaffold_3065	46959	G	C	248	693.77	noncoding	Transversion	0/1	Unannotated
	Scaffold_3065	47259	C	A	23	567.77	noncoding	Transversion	0/1	30S ribosomal protein S12-B, chloroplastic
	Scaffold_3066	21409	A	T	10	295.78	noncoding	Transversion	1/1	Unannotated
	Scaffold_3068	12997	A	T	89	3361.77	noncoding	Transversion	1/1	Unannotated
	Scaffold_3068	12998	G	T	47	1807.77	noncoding	Transversion	1/1	Unannotated
	Scaffold_3068	54069	A	C	250	8846.77	noncoding	Transversion	1/1	Photosystem II protein D1 (PSII D1 protein) (EC 1.10.3.9) (Photosystem II Q... more Photosystem II protein D1 (PSII D1 protein) (EC 1.10.3.9) (Photosystem II Q(B) protein)
	Scaffold_3068	54070	G	T	250	9137.77	noncoding	Transversion	1/1	Photosystem II protein D1 (PSII D1 protein) (EC 1.10.3.9) (Photosystem II Q... more Photosystem II protein D1 (PSII D1 protein) (EC 1.10.3.9) (Photosystem II Q(B) protein)
	Scaffold_3075	36184	A	C	59	2043.77	noncoding	Transversion	1/1	Protein Ycf2
	Scaffold_3075	36335	A	T	37	1368.77	noncoding	Transversion	1/1	Protein Ycf2
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