2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_149 216357 A T 10 69.77 intron Transversion 0/1 Unannotated
Scaffold_149 253313 G T 21 84.77 intron Transversion 0/1 Unannotated
Scaffold_149 392133 T G 31 561.77 intron Transversion 0/1 Unannotated
Scaffold_149 442950 A T 31 34.77 exon Transversion 0/1 Unannotated
Scaffold_150 149486 T G 34 112.77 CDS Transversion 0/1 Unannotated
Scaffold_150 183598 A T 219 302.77 CDS Transversion 0/1 Unannotated
Scaffold_150 187566 C A 12 61.77 intron Transversion 0/1 Unannotated
Scaffold_150 209792 C G 43 462.77 intron Transversion 0/1 Unannotated
Scaffold_150 254348 C G 10 94.77 exon Transversion 0/1 Unannotated
Scaffold_150 486890 C A 123 68.77 exon Transversion 0/1 Unannotated
Scaffold_150 498776 A T 12 48.77 CDS Transversion 0/1 Unannotated
Scaffold_150 677449 G T 23 247.77 intron Transversion 0/1 Unannotated
Scaffold_150 677788 C A 96 213.77 CDS Transversion 0/1 Probable cellulose synthase A catalytic subunit 8 [UDP-forming] (EC 2.4.1.1... more
Probable cellulose synthase A catalytic subunit 8 [UDP-forming] (EC 2.4.1.12) (OsCesA8)
Scaffold_150 677818 T A 87 2121.77 CDS Transversion 0/1 Probable cellulose synthase A catalytic subunit 8 [UDP-forming] (EC 2.4.1.1... more
Probable cellulose synthase A catalytic subunit 8 [UDP-forming] (EC 2.4.1.12) (OsCesA8)
Scaffold_150 677821 T A 85 2100.77 CDS Transversion 0/1 Probable cellulose synthase A catalytic subunit 8 [UDP-forming] (EC 2.4.1.1... more
Probable cellulose synthase A catalytic subunit 8 [UDP-forming] (EC 2.4.1.12) (OsCesA8)
Scaffold_150 678355 T A 61 1375.77 CDS Transversion 0/1 Probable cellulose synthase A catalytic subunit 8 [UDP-forming] (EC 2.4.1.1... more
Probable cellulose synthase A catalytic subunit 8 [UDP-forming] (EC 2.4.1.12) (OsCesA8)
Scaffold_150 679004 A T 52 935.77 CDS Transversion 0/1 Probable cellulose synthase A catalytic subunit 8 [UDP-forming] (EC 2.4.1.1... more
Probable cellulose synthase A catalytic subunit 8 [UDP-forming] (EC 2.4.1.12) (OsCesA8)
Scaffold_151 101661 A C 78 114.77 CDS Transversion 0/1 Unannotated
Scaffold_151 248533 G T 52 1088.77 exon Transversion 0/1 Unannotated
Scaffold_151 249206 T G 24 115.77 exon Transversion 0/1 Unannotated

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