2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_670 23491 C A 21 50.77 exon Transversion 0/1 Unannotated
Scaffold_672 9161 G T 21 149.77 noncoding Transversion 0/1 Unannotated
Scaffold_673 60402 A T 10 270.22 noncoding Transversion 0/1 Unannotated
Scaffold_673 60403 A T 17 464.18 noncoding Transversion 0/1 Unannotated
Scaffold_673 60518 G T 29 84.77 noncoding Transversion 0/1 Unannotated
Scaffold_675 48572 A C 250 863.77 exon Transversion 0/1 Class V chitinase (AtChiC) (EC 3.2.1.14)
Scaffold_675 49406 G C 36 730.77 intron Transversion 0/1 Unannotated
Scaffold_676 25627 T A 11 101.77 intron Transversion 0/1 Unannotated
Scaffold_676 25632 A T 15 48.77 intron Transversion 0/1 Unannotated
Scaffold_676 62492 A T 11 112.77 CDS Transversion 0/1 T-complex protein 1 subunit eta (TCP-1-eta) (CCT-eta) (Chaperonin CCT7)
Scaffold_682 38120 T G 14 248.03 intron Transversion 0/1 Unannotated
Scaffold_684 9066 T A 46 511.77 noncoding Transversion 0/1 Unannotated
Scaffold_684 9154 T A 30 637.77 noncoding Transversion 0/1 Unannotated
Scaffold_685 59288 T G 56 276.77 exon Transversion 0/1 Unannotated
Scaffold_686 4100 G T 30 130.77 exon Transversion 0/1 Unannotated
Scaffold_690 12988 A C 39 707.77 noncoding Transversion 0/1 Expansin-A1 (AtEXPA1) (Alpha-expansin-1) (At-EXP1) (AtEx1) (Ath-ExpAlpha-1.... more
Expansin-A1 (AtEXPA1) (Alpha-expansin-1) (At-EXP1) (AtEx1) (Ath-ExpAlpha-1.2)
Scaffold_690 25323 A C 250 874.77 noncoding Transversion 0/1 Unannotated
Scaffold_690 25446 G T 36 919.78 noncoding Transversion 0/1 Ferredoxin--NADP reductase, leaf isozyme, chloroplastic (FNR) (EC 1.18.1.2)
Scaffold_690 26006 A C 27 340.77 noncoding Transversion 0/1 Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic (EC 1.18.1.2) (Le... more
Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic (EC 1.18.1.2) (Leaf FNR 2) (FNR-2) (Os-LFNR2)
Scaffold_690 26007 G T 31 358.77 noncoding Transversion 0/1 Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic (EC 1.18.1.2) (Le... more
Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic (EC 1.18.1.2) (Leaf FNR 2) (FNR-2) (Os-LFNR2)

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