2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_2640 66045 A C 250 540.77 exon Transversion 0/1 Unannotated
Scaffold_2647 1468 C G 11 38.77 CDS Transversion 0/1 Unannotated
Scaffold_2647 1504 C G 21 396.77 CDS Transversion 0/1 Unannotated
Scaffold_2648 7687 C A 39 103.77 noncoding Transversion 0/1 Unannotated
Scaffold_2648 7734 C A 45 524.77 noncoding Transversion 0/1 Unannotated
Scaffold_2648 65614 A T 40 624.77 noncoding Transversion 0/1 Chavicol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol O-methyltransfera... more
Chavicol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol O-methyltransferase CVOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase CVOMT1)
Scaffold_2648 65616 C A 71 569.77 noncoding Transversion 0/1 Chavicol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol O-methyltransfera... more
Chavicol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol O-methyltransferase CVOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase CVOMT1)
Scaffold_2648 66385 T G 11 93.77 intron Transversion 0/1 Desmethylxanthohumol 6'-O-methyltransferase (EC 2.1.1.338) (O-methyltransfe... more
Desmethylxanthohumol 6'-O-methyltransferase (EC 2.1.1.338) (O-methyltransferase 1) (HlOMT1)
Scaffold_2654 34357 T A 54 1307.77 exon Transversion 0/1 Unannotated
Scaffold_2659 59456 C G 18 117.77 CDS Transversion 0/1 Unannotated
Scaffold_2660 10330 G T 55 1015.77 noncoding Transversion 0/1 Unannotated
Scaffold_2660 10332 G T 55 347.77 noncoding Transversion 0/1 Unannotated
Scaffold_2662 29614 A T 24 71.77 CDS Transversion 0/1 Vacuolar-sorting protein BRO1 (BRO domain-containing protein 1) (AtBRO1)
Scaffold_2664 59514 A T 13 76.77 exon Transversion 0/1 Unannotated
Scaffold_2664 59534 A T 13 118.77 exon Transversion 0/1 Unannotated
Scaffold_2667 59435 T A 58 393.77 CDS Transversion 0/1 Unannotated
Scaffold_2668 54788 T G 36 93.77 noncoding Transversion 0/1 Unannotated
Scaffold_2669 2079 C G 17 308.77 intron Transversion 0/1 Chaperone protein dnaJ A6, chloroplastic (atDjA6) (Chaperone protein dnaJ A... more
Chaperone protein dnaJ A6, chloroplastic (atDjA6) (Chaperone protein dnaJ A26) (AtDjA26)
Scaffold_2669 39346 G T 13 37.77 noncoding Transversion 0/1 Unannotated
Scaffold_2669 39386 A T 65 491.77 noncoding Transversion 0/1 Unannotated

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