2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_3532 30345 C G 17 85.77 intron Transversion 0/1 Unannotated
Scaffold_3532 32253 G C 40 91.77 CDS Transversion 0/1 Two-component response regulator-like APRR1 (ABI3-interacting protein 1) (P... more
Two-component response regulator-like APRR1 (ABI3-interacting protein 1) (Pseudo-response regulator 1) (Timing of CAB expression 1)
Scaffold_3532 32256 T G 38 45.77 CDS Transversion 0/1 Two-component response regulator-like APRR1 (ABI3-interacting protein 1) (P... more
Two-component response regulator-like APRR1 (ABI3-interacting protein 1) (Pseudo-response regulator 1) (Timing of CAB expression 1)
Scaffold_3536 24016 G T 57 725.77 CDS Transversion 0/1 Unannotated
Scaffold_3536 35642 G C 12 247.77 noncoding Transversion 0/1 Unannotated
Scaffold_3538 30609 A C 21 90.77 noncoding Transversion 0/1 Unannotated
Scaffold_3538 30666 A C 24 345.77 noncoding Transversion 0/1 Unannotated
Scaffold_3542 28848 T A 32 460.77 intron Transversion 0/1 Unannotated
Scaffold_3544 3078 T G 79 1838.77 CDS Transversion 0/1 RNA polymerase II C-terminal domain phosphatase-like 1 (FCP-like 1) (EC 3.1... more
RNA polymerase II C-terminal domain phosphatase-like 1 (FCP-like 1) (EC 3.1.3.16) (Carboxyl-terminal phosphatase-like 1) (AtCPL1) (CTD phosphatase-like 1) (Protein FIERY 2) (Protein JASMONATE OVEREXPRESSING 1) (Protein SHINY 4)
Scaffold_3544 3156 A T 36 255.77 CDS Transversion 0/1 RNA polymerase II C-terminal domain phosphatase-like 1 (FCP-like 1) (EC 3.1... more
RNA polymerase II C-terminal domain phosphatase-like 1 (FCP-like 1) (EC 3.1.3.16) (Carboxyl-terminal phosphatase-like 1) (AtCPL1) (CTD phosphatase-like 1) (Protein FIERY 2) (Protein JASMONATE OVEREXPRESSING 1) (Protein SHINY 4)
Scaffold_3544 3174 C G 24 238.77 CDS Transversion 0/1 RNA polymerase II C-terminal domain phosphatase-like 1 (FCP-like 1) (EC 3.1... more
RNA polymerase II C-terminal domain phosphatase-like 1 (FCP-like 1) (EC 3.1.3.16) (Carboxyl-terminal phosphatase-like 1) (AtCPL1) (CTD phosphatase-like 1) (Protein FIERY 2) (Protein JASMONATE OVEREXPRESSING 1) (Protein SHINY 4)
Scaffold_3544 22802 G T 12 169.77 exon Transversion 0/1 Unannotated
Scaffold_3544 43499 A C 47 90.77 intron Transversion 0/1 Unannotated
Scaffold_3545 8510 A T 247 223.77 noncoding Transversion 0/1 Unannotated
Scaffold_3547 28440 T A 12 264.77 noncoding Transversion 0/1 Unannotated
Scaffold_3556 4986 A C 13 279.77 noncoding Transversion 0/1 Unannotated
Scaffold_3562 1155 G T 27 216.77 exon Transversion 0/1 Unannotated
Scaffold_3567 25805 A T 10 59.77 noncoding Transversion 0/1 Unannotated
Scaffold_3574 51034 C A 56 60.77 intron Transversion 0/1 Unannotated
Scaffold_3574 51050 A C 212 2044.77 CDS Transversion 0/1 Puromycin-sensitive aminopeptidase (PSA) (EC 3.4.11.14) (Cytosol alanyl ami... more
Puromycin-sensitive aminopeptidase (PSA) (EC 3.4.11.14) (Cytosol alanyl aminopeptidase) (AAP-S)

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