2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_10 1784092 C T 52 183.77 exon Transition 0/1 Unannotated
Scaffold_10 1784097 A G 52 366.77 exon Transition 0/1 Unannotated
Scaffold_10 1784220 C T 110 1766.77 exon Transition 0/1 Unannotated
Scaffold_10 1784255 T C 69 752.77 exon Transition 0/1 Unannotated
Scaffold_10 1784283 A G 83 885.77 exon Transition 0/1 Unannotated
Scaffold_10 1784367 G A 70 1433.77 exon Transition 0/1 Unannotated
Scaffold_10 1784397 T C 57 1110.77 exon Transition 0/1 Unannotated
Scaffold_10 1784433 G A 30 463.77 exon Transition 0/1 Unannotated
Scaffold_10 1820308 G A 43 679.77 CDS Transition 0/1 Unannotated
Scaffold_10 1820467 C T 12 44.77 intron Transition 0/1 Unannotated
Scaffold_10 1820670 C T 25 226.77 CDS Transition 0/1 Unannotated
Scaffold_10 2026158 C T 14 236.77 noncoding Transition 0/1 Unannotated
Scaffold_11 448493 T C 16 34.77 exon Transition 0/1 Unannotated
Scaffold_11 484903 T C 13 126.22 intron Transition 0/1 Unannotated
Scaffold_11 612639 A G 31 34.77 intron Transition 0/1 Magnesium-chelatase subunit ChlH, chloroplastic (Mg-chelatase subunit H) (E... more
Magnesium-chelatase subunit ChlH, chloroplastic (Mg-chelatase subunit H) (EC 6.6.1.1) (ABA-binding protein) (Mg-protoporphyrin IX chelatase subunit ChlH) (Protein CONDITIONAL CHLORINA) (Protein GENOMES UNCOUPLED 5) (Protein RAPID TRANSPIRATION IN DETACHED
Scaffold_11 614619 C A,G 13 442.77 CDS Transition 1/2 Magnesium-chelatase subunit ChlH, chloroplastic (Mg-chelatase subunit H) (E... more
Magnesium-chelatase subunit ChlH, chloroplastic (Mg-chelatase subunit H) (EC 6.6.1.1) (ABA-binding protein) (Mg-protoporphyrin IX chelatase subunit ChlH) (Protein CONDITIONAL CHLORINA) (Protein GENOMES UNCOUPLED 5) (Protein RAPID TRANSPIRATION IN DETACHED
Scaffold_11 674849 C T 10 88.77 intron Transition 0/1 Unannotated
Scaffold_11 677369 A G 250 146.77 CDS Transition 0/1 Unannotated
Scaffold_11 690130 G A 60 797.77 CDS Transition 0/1 Chalcone synthase 1 (EC 2.3.1.74) (Naringenin-chalcone synthase 1)
Scaffold_11 690178 A G 26 429.77 CDS Transition 0/1 Chalcone synthase 1 (EC 2.3.1.74) (Naringenin-chalcone synthase 1)

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