2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_26 643959 G A 10 185.28 CDS Transition 0/1 Unannotated
Scaffold_26 813236 T C 106 1318.77 CDS Transition 0/1 Unannotated
Scaffold_26 1017779 A G 10 97.77 noncoding Transition 0/1 Unannotated
Scaffold_26 1214619 G A 12 82.77 intron Transition 0/1 Unannotated
Scaffold_26 1226436 A G 10 39.77 exon Transition 0/1 Unannotated
Scaffold_26 1248667 C T 31 133.77 CDS Transition 0/1 Unannotated
Scaffold_26 1364510 C T 11 164.77 exon Transition 0/1 Unannotated
Scaffold_26 1367698 G A 94 509.77 exon Transition 0/1 Unannotated
Scaffold_26 1367751 G A 68 317.77 exon Transition 0/1 Unannotated
Scaffold_26 1439058 G A 48 52.77 intron Transition 0/1 Unannotated
Scaffold_26 1538751 A G 26 49.77 CDS Transition 0/1 Threonine--tRNA ligase, chloroplastic/mitochondrial 2 (EC 6.1.1.3) (Protein... more
Threonine--tRNA ligase, chloroplastic/mitochondrial 2 (EC 6.1.1.3) (Protein EMBRYO DEFECTIVE 2761) (Threonyl-tRNA synthetase) (ThrRS)
Scaffold_26 1750774 A G 30 555.77 CDS Transition 0/1 Unannotated
Scaffold_27 46998 T C 21 42.77 CDS Transition 0/1 Unannotated
Scaffold_27 201492 A G 20 31.77 exon Transition 0/1 Unannotated
Scaffold_27 304487 C T 79 117.77 exon Transition 0/1 Unannotated
Scaffold_27 730367 C T 47 521.77 CDS Transition 0/1 Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (e... more
Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (eIF3 p110)
Scaffold_27 730406 G A 43 423.77 CDS Transition 0/1 Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (e... more
Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (eIF3 p110)
Scaffold_27 731260 T C 99 630.77 CDS Transition 0/1 Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (e... more
Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (eIF3 p110)
Scaffold_27 751375 G A 98 530.77 CDS Transition 0/1 Unannotated
Scaffold_27 788803 G A 48 708.77 CDS Transition 0/1 Unannotated

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