2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_55 31028 T C 14 148.77 intron Transition 0/1 Unannotated
Scaffold_55 218132 T C 12 234.98 CDS Transition 0/1 Unannotated
Scaffold_55 283787 T C 13 225.77 intron Transition 0/1 Unannotated
Scaffold_55 286873 A G 38 60.77 exon Transition 0/1 Unannotated
Scaffold_55 333507 G A 20 168.77 CDS Transition 0/1 Unannotated
Scaffold_55 334038 A G 15 191.77 intron Transition 0/1 Unannotated
Scaffold_55 334060 G A 19 220.77 intron Transition 0/1 Unannotated
Scaffold_55 662481 G A 41 105.77 exon Transition 0/1 Unannotated
Scaffold_55 671307 C T 99 213.77 CDS Transition 0/1 Pentatricopeptide repeat-containing protein At4g18520, chloroplastic (Prote... more
Pentatricopeptide repeat-containing protein At4g18520, chloroplastic (Protein PIGMENT-DEFICIENT MUTANT 1) (Protein SEEDLING LETHAL 1)
Scaffold_55 671619 G A 96 751.77 CDS Transition 0/1 Pentatricopeptide repeat-containing protein At4g18520, chloroplastic (Prote... more
Pentatricopeptide repeat-containing protein At4g18520, chloroplastic (Protein PIGMENT-DEFICIENT MUTANT 1) (Protein SEEDLING LETHAL 1)
Scaffold_55 1030003 C T 74 316.77 intron Transition 0/1 Unannotated
Scaffold_55 1030006 T C 50 209.77 intron Transition 0/1 Unannotated
Scaffold_55 1365168 C T 59 75.77 exon Transition 0/1 Unannotated
Scaffold_56 170427 G A 72 212.77 CDS Transition 0/1 ATP-dependent zinc metalloprotease FTSH 7, chloroplastic (OsFTSH7) (EC 3.4.... more
ATP-dependent zinc metalloprotease FTSH 7, chloroplastic (OsFTSH7) (EC 3.4.24.-)
Scaffold_56 173210 T C 132 155.77 CDS Transition 0/1 ATP-dependent zinc metalloprotease FTSH 7, chloroplastic (OsFTSH7) (EC 3.4.... more
ATP-dependent zinc metalloprotease FTSH 7, chloroplastic (OsFTSH7) (EC 3.4.24.-)
Scaffold_56 678911 A G 49 69.77 intron Transition 0/1 Unannotated
Scaffold_56 728946 C T 10 44.77 intron Transition 0/1 Unannotated
Scaffold_56 728951 A G 21 58.77 intron Transition 0/1 Unannotated
Scaffold_56 746160 A G 82 438.77 exon Transition 0/1 Unannotated
Scaffold_56 885223 A G 250 2008.77 exon Transition 0/1 Unannotated

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