2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_56 1161950 G A 14 294.77 intron Transition 0/1 Unannotated
Scaffold_56 1198950 G A 39 50.77 CDS Transition 0/1 Unannotated
Scaffold_56 1216553 A G 75 1075.77 CDS Transition 0/1 Unannotated
Scaffold_57 232926 A G 18 30.77 intron Transition 0/1 Unannotated
Scaffold_57 348385 G A 10 110.77 noncoding Transition 0/1 Unannotated
Scaffold_57 348467 C T 10 147.77 noncoding Transition 0/1 Unannotated
Scaffold_57 444486 T C 32 32.77 CDS Transition 0/1 Unannotated
Scaffold_57 444518 A G 15 267.77 CDS Transition 0/1 Unannotated
Scaffold_57 630937 T C 10 67.77 intron Transition 0/1 Unannotated
Scaffold_57 863812 C T 137 208.77 exon Transition 0/1 Unannotated
Scaffold_57 940867 C T 22 285.77 exon Transition 0/1 Probable LRR receptor-like serine/threonine-protein kinase At1g12460 (EC 2.... more
Probable LRR receptor-like serine/threonine-protein kinase At1g12460 (EC 2.7.11.1)
Scaffold_57 941008 G A 31 697.77 exon Transition 0/1 Probable LRR receptor-like serine/threonine-protein kinase At1g12460 (EC 2.... more
Probable LRR receptor-like serine/threonine-protein kinase At1g12460 (EC 2.7.11.1)
Scaffold_57 941044 G A 28 564.77 exon Transition 0/1 Probable LRR receptor-like serine/threonine-protein kinase At1g12460 (EC 2.... more
Probable LRR receptor-like serine/threonine-protein kinase At1g12460 (EC 2.7.11.1)
Scaffold_57 1045858 T C 22 38.77 CDS Transition 0/1 Unannotated
Scaffold_57 1339462 T C 15 259.77 CDS Transition 0/1 Beta-galactosidase 1 (Lactase 1) (EC 3.2.1.23)
Scaffold_57 1389516 A G 89 124.77 CDS Transition 0/1 Unannotated
Scaffold_57 1525031 G A 95 222.77 exon Transition 0/1 Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial ... more
Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial (Glu-AdT subunit B) (EC 6.3.5.-)
Scaffold_57 1525098 T C 87 140.77 exon Transition 0/1 Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial ... more
Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial (Glu-AdT subunit B) (EC 6.3.5.-)
Scaffold_57 1525171 T C 213 1623.77 exon Transition 0/1 Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial ... more
Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial (Glu-AdT subunit B) (EC 6.3.5.-)
Scaffold_57 1525284 C T 144 2949.77 exon Transition 0/1 Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial ... more
Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial (Glu-AdT subunit B) (EC 6.3.5.-)

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