2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_1422 1086 A G 35 340.77 noncoding Transition 0/1 Unannotated
Scaffold_1422 32875 C T 16 58.77 noncoding Transition 0/1 Unannotated
Scaffold_1431 35931 A G 27 302.77 exon Transition 0/1 Unannotated
Scaffold_1450 17330 G A 39 105.77 noncoding Transition 0/1 Unannotated
Scaffold_1450 17519 G A 115 1073.77 noncoding Transition 0/1 Unannotated
Scaffold_1450 17528 C T 98 1053.77 noncoding Transition 0/1 Unannotated
Scaffold_1456 30640 G A 36 495.77 CDS Transition 0/1 Unannotated
Scaffold_1456 31055 A G 20 93.77 CDS Transition 0/1 Unannotated
Scaffold_1456 31091 T C 47 377.77 CDS Transition 0/1 Unannotated
Scaffold_1456 48592 G A 11 48.77 noncoding Transition 0/1 BTB/POZ domain-containing protein At1g30440
Scaffold_1456 48593 C T 12 105.77 noncoding Transition 0/1 BTB/POZ domain-containing protein At1g30440
Scaffold_1457 43910 T C 12 31.77 noncoding Transition 0/1 Unannotated
Scaffold_1457 43911 T C 12 31.77 noncoding Transition 0/1 Unannotated
Scaffold_1458 4990 G A 11 88.77 noncoding Transition 0/1 Peptide chain release factor PrfB1, chloroplastic (AtPrfB1) (AtPrfB) (Prote... more
Peptide chain release factor PrfB1, chloroplastic (AtPrfB1) (AtPrfB) (Protein HIGH CHLOROPHYLL FLUORESCENCE 109)
Scaffold_1459 35971 T C 32 54.77 noncoding Transition 0/1 Unannotated
Scaffold_1473 3387 G A 15 37.77 noncoding Transition 0/1 Unannotated
Scaffold_1476 13888 G A 25 589.77 CDS Transition 0/1 Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochon... more
Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial (FGAM synthase) (FGAMS) (EC 6.3.5.3) (Formylglycinamide ribonucleotide amidotransferase) (FGAR amidotransferase) (FGAR-AT) (Formylglycinamide ribotide amidotransferase)
Scaffold_1484 43181 G A 19 119.77 noncoding Transition 0/1 Unannotated
Scaffold_1487 8399 C T 64 1294.77 noncoding Transition 0/1 Unannotated
Scaffold_1499 34102 C T 14 131.89 noncoding Transition 0/1 Unannotated

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