2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_1585 5456 T C 12 133.77 CDS Transition 0/1 Heat shock 70 kDa protein BIP1 (Luminal-binding protein 1) (OsBiP1)
Scaffold_1589 33427 A G 66 212.77 noncoding Transition 0/1 Copper transport protein CCH (Copper chaperone CCH)
Scaffold_1592 42201 T C 11 192.98 intron Transition 0/1 Unannotated
Scaffold_1593 18105 T C 98 244.77 exon Transition 0/1 Unannotated
Scaffold_1609 26892 A G 13 274.77 intron Transition 0/1 Unannotated
Scaffold_1615 44643 A G 24 283.77 CDS Transition 0/1 Unannotated
Scaffold_1616 29343 C T 43 812.77 noncoding Transition 0/1 Unannotated
Scaffold_1626 39112 G A 31 282.77 exon Transition 0/1 Unannotated
Scaffold_1649 32516 A G 89 218.77 exon Transition 0/1 Unannotated
Scaffold_1649 32553 C T 41 106.77 exon Transition 0/1 Unannotated
Scaffold_1654 40730 G A 78 649.77 noncoding Transition 0/1 Expansin-A5 (AtEXPA5) (Alpha-expansin-5) (At-EXP5) (AtEx5) (Ath-ExpAlpha-1.... more
Expansin-A5 (AtEXPA5) (Alpha-expansin-5) (At-EXP5) (AtEx5) (Ath-ExpAlpha-1.4)
Scaffold_1654 40937 C T 68 589.77 noncoding Transition 0/1 Unannotated
Scaffold_1654 40957 T C 44 466.77 noncoding Transition 0/1 Unannotated
Scaffold_1660 12863 A G 12 277.9 noncoding Transition 0/1 Unannotated
Scaffold_1660 12874 T C 12 254.9 noncoding Transition 0/1 Unannotated
Scaffold_1666 15537 A G 142 706.77 CDS Transition 0/1 Unannotated
Scaffold_1668 7085 A G 117 150.77 CDS Transition 0/1 Unannotated
Scaffold_1668 7086 A G 119 2476.77 CDS Transition 0/1 Unannotated
Scaffold_1670 133 A G 16 63.77 CDS Transition 0/1 Unannotated
Scaffold_1688 13158 A G 14 153.41 noncoding Transition 0/1 Unannotated

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