BioInfoKnowledgeBase

This Section provides information about various tools and softwares according to categories in which they are used. It attempts to cover maximum areas of bioinformatics.

Starting from analysis of single nucleotide and protein sequence, it tries to cover Genome and Proteome Analysis alongwith covering Pathway Analysis and Phylogenetic Analysis.

1. Genome Annotation: Tools for Genome Annotation (generally used), Gene Prediction, Genome Assembly, Ontology.

2. Genome Analysis: Tools for Genome Analysis, Metagenome Analysis and Genome Alignment. It also includes information about various Genome Browsers.

3. Gene Analysis: Generally used tools for Gene Analysis alongwith tools for Gene Regulation, Transcription Element Analysis, Splicing, Expression Analysis and Pathway Analysis.

4. Nucleotide Analysis: Tools for General Sequence Analysis, Motif identification, Nucleotide Alignment, Genome Alignment, Probe & Primer designing, Restriction Enzyme Mapping, SNP identification, Structure and Sequence Detection.

5. Protein Analysis: Tools for Protein Sequence Analysis, Secondary Structure and Transmembrane Segment Prediction, Super Secondary Structure, 3D-motif Analysis, Tertiary Structure and Fold Prediction, MHC peptide prediction, Modelling and Simulations, Structure Visualization, Functional Pattern Recognition.

6. Evolutionary Analysis: Tools for Phylogenetic and Evolutionary analysis.