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M-83 SNPs

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Total record count: 7933.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_3951 2280 C A 18 259.77 exon Transversion 0/1 Unannotated
Scaffold_3954 35901 G C 35 406.77 noncoding Transversion 0/1 Unannotated
Scaffold_3954 58927 C G 26 191.77 exon Transversion 0/1 Unannotated
Scaffold_3954 58937 C G 27 191.77 exon Transversion 0/1 Unannotated
Scaffold_3956 56150 C A 12 64.77 exon Transversion 0/1 Unannotated
Scaffold_3956 56152 T A 11 67.77 exon Transversion 0/1 Unannotated
Scaffold_3957 14299 C A 12 351.56 CDS Transversion 0/1 Unannotated
Scaffold_3957 17379 A T 248 268.77 intron Transversion 0/1 Unannotated
Scaffold_3961 8239 G T 250 51.77 exon Transversion 0/1 ATP synthase subunit alpha, mitochondrial
Scaffold_3961 56317 G T 250 125.77 noncoding Transversion 0/1 Unannotated
Scaffold_3961 56332 C G 250 127.77 noncoding Transversion 0/1 Unannotated
Scaffold_3962 28750 A T 41 629.77 exon Transversion 0/1 Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic
Scaffold_3962 28758 A T 53 761.77 exon Transversion 0/1 Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic
Scaffold_3962 28816 T A 37 65.77 exon Transversion 0/1 Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic
Scaffold_3962 29254 G T 45 679.77 exon Transversion 0/1 Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic
Scaffold_3962 29350 C A 28 110.77 exon Transversion 0/1 Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic
Scaffold_3969 44864 T G 22 276.77 exon Transversion 0/1 Unannotated
Scaffold_3969 45248 G T 17 262.77 exon Transversion 0/1 Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (A... more
Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_3969 45750 A C 16 66.77 exon Transversion 0/1 Unannotated
Scaffold_3969 45965 T G 33 120.77 exon Transversion 0/1 Retrovirus-related Pol polyprotein from transposon RE2 (Retro element 2) (A... more
Retrovirus-related Pol polyprotein from transposon RE2 (Retro element 2) (AtRE2) [Includes: Protease RE2 (EC 3.4.23.-); Reverse transcriptase RE2 (EC 2.7.7.49); Endonuclease RE2]

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