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  3. M-83 SNPs

M-83 SNPs

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Total record count: 7933.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_3650 49299 C A 216 1476.77 noncoding Transversion 0/1 Unannotated
Scaffold_3651 3400 A C 22 486.77 noncoding Transversion 0/1 Unannotated
Scaffold_3651 3446 G T 48 653.77 noncoding Transversion 0/1 Unannotated
Scaffold_3651 3506 A C 30 233.77 noncoding Transversion 0/1 Unannotated
Scaffold_3651 3532 T A 27 607.79 noncoding Transversion 0/1 Unannotated
Scaffold_3652 63388 A C 40 196.77 noncoding Transversion 0/1 Unannotated
Scaffold_3652 63389 C A 40 193.77 noncoding Transversion 0/1 Unannotated
Scaffold_3660 15682 A T 238 2942.77 noncoding Transversion 0/1 Unannotated
Scaffold_3660 15786 A C 250 195.77 exon Transversion 0/1 Unannotated
Scaffold_3663 5704 A C 10 30.77 noncoding Transversion 0/1 Unannotated
Scaffold_3663 21302 G T 10 64.77 noncoding Transversion 0/1 Unannotated
Scaffold_3663 21304 A T 11 101.77 noncoding Transversion 0/1 Unannotated
Scaffold_3663 21447 C A 239 860.77 exon Transversion 0/1 Probable cellulose synthase A catalytic subunit 1 [UDP-forming] (EC 2.4.1.1... more
Probable cellulose synthase A catalytic subunit 1 [UDP-forming] (EC 2.4.1.12) (OsCesA1)
Scaffold_3663 21486 C A 144 290.77 exon Transversion 0/1 Probable cellulose synthase A catalytic subunit 1 [UDP-forming] (EC 2.4.1.1... more
Probable cellulose synthase A catalytic subunit 1 [UDP-forming] (EC 2.4.1.12) (OsCesA1)
Scaffold_3663 21643 A T 17 166.77 CDS Transversion 0/1 Probable cellulose synthase A catalytic subunit 1 [UDP-forming] (EC 2.4.1.1... more
Probable cellulose synthase A catalytic subunit 1 [UDP-forming] (EC 2.4.1.12) (OsCesA1)
Scaffold_3663 21888 G C 11 52.77 CDS Transversion 0/1 Probable cellulose synthase A catalytic subunit 1 [UDP-forming] (EC 2.4.1.1... more
Probable cellulose synthase A catalytic subunit 1 [UDP-forming] (EC 2.4.1.12) (OsCesA1)
Scaffold_3663 22792 A T 12 287.18 CDS Transversion 0/1 Novel plant SNARE 12 (AtNPSN12)
Scaffold_3665 2926 A C 25 31.77 CDS Transversion 0/1 Unannotated
Scaffold_3672 1966 T A 71 36.77 noncoding Transversion 0/1 Unannotated
Scaffold_3673 6525 A T 12 69.77 CDS Transversion 0/1 Unannotated

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