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M-83 SNPs

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Total record count: 7933.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_690 25323 A C 24 447.77 noncoding Transversion 0/1 Unannotated
Scaffold_699 65643 T G 21 74.77 exon Transversion 0/1 Unannotated
Scaffold_701 47001 G T 10 30.77 CDS Transversion 0/1 Unannotated
Scaffold_709 40151 C G 10 30.77 exon Transversion 0/1 Cleavage and polyadenylation specificity factor subunit 3-I (EC 3.1.27.-) (... more
Cleavage and polyadenylation specificity factor subunit 3-I (EC 3.1.27.-) (Cleavage and polyadenylation specificity factor 73 kDa subunit I) (AtCPSF73-I) (CPSF 73 kDa subunit I)
Scaffold_709 40152 C A 10 30.77 exon Transversion 0/1 Cleavage and polyadenylation specificity factor subunit 3-I (EC 3.1.27.-) (... more
Cleavage and polyadenylation specificity factor subunit 3-I (EC 3.1.27.-) (Cleavage and polyadenylation specificity factor 73 kDa subunit I) (AtCPSF73-I) (CPSF 73 kDa subunit I)
Scaffold_712 58542 T G 18 40.77 exon Transversion 0/1 Unannotated
Scaffold_724 37219 A C 12 89.77 intron Transversion 0/1 Unannotated
Scaffold_728 46627 G C 10 33.77 CDS Transversion 0/1 CDPK-related kinase 1 (AtCRK1) (EC 2.7.11.1) (Calcium/calmodulin-dependent ... more
CDPK-related kinase 1 (AtCRK1) (EC 2.7.11.1) (Calcium/calmodulin-dependent protein kinase 3) (Calmodulin-binding protein kinase 3) (AtCBK3) (CaM-binding protein kinase 3)
Scaffold_728 46726 C A 10 30.77 CDS Transversion 0/1 CDPK-related kinase 1 (AtCRK1) (EC 2.7.11.1) (Calcium/calmodulin-dependent ... more
CDPK-related kinase 1 (AtCRK1) (EC 2.7.11.1) (Calcium/calmodulin-dependent protein kinase 3) (Calmodulin-binding protein kinase 3) (AtCBK3) (CaM-binding protein kinase 3)
Scaffold_732 46765 A T 12 298.18 intron Transversion 0/1 Unannotated
Scaffold_739 18277 A C 23 37.77 exon Transversion 0/1 tRNA(adenine(34)) deaminase, chloroplastic (TADA) (EC 3.5.4.33) (tRNA adeno... more
tRNA(adenine(34)) deaminase, chloroplastic (TADA) (EC 3.5.4.33) (tRNA adenosine deaminase arginine) (tRNA arginine adenosine deaminase)
Scaffold_739 43444 G T 10 30.77 exon Transversion 0/1 Unannotated
Scaffold_741 7773 G C 15 107.77 CDS Transversion 0/1 BTB/POZ domain-containing protein At5g66560
Scaffold_744 11602 C A 17 86.77 CDS Transversion 0/1 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 (EC 2.4.1.15) (Tre... more
Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 (EC 2.4.1.15) (Trehalose-6-phosphate synthase 1) (AtTPS1)
Scaffold_753 63657 T A 18 120.77 intron Transversion 0/1 Unannotated
Scaffold_753 64783 A T 40 121.77 intron Transversion 0/1 Protein NRT1/ PTR FAMILY 5.4 (AtNPF5.4)
Scaffold_753 65579 G T 204 199.77 CDS Transversion 0/1 Protein NRT1/ PTR FAMILY 1.2 (AtNPF1.2) (Nitrate transporter 1.11)
Scaffold_757 44399 T A 32 1132.77 intron Transversion 1/1 Alcohol dehydrogenase-like 6 (EC 1.1.1.1)
Scaffold_760 626 C A 24 715.88 intron Transversion 0/1 Unannotated
Scaffold_760 11704 T A 14 355.28 intron Transversion 0/1 Unannotated

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