SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_121 396451 A G 25 34.77 exon Transition 0/1 Unannotated
Scaffold_122 149825 G A 19 80.77 noncoding Transition 0/1 Unannotated
Scaffold_122 149826 A G 19 83.77 noncoding Transition 0/1 Unannotated
Scaffold_122 152887 C T 47 31.79 CDS Transition 0/1 Calcium-binding protein CP1 (NaCl-inducible Ca2+-binding protein) (AtCP1)
Scaffold_122 174070 A G 18 33.77 noncoding Transition 0/1 Unannotated
Scaffold_122 283690 T C 11 64.77 CDS Transition 0/1 Phosphatidylinositol 4-kinase gamma 4 (AtPI4Kgamma4) (PI-4Kgamma4) (PI4K ga... more
Phosphatidylinositol 4-kinase gamma 4 (AtPI4Kgamma4) (PI-4Kgamma4) (PI4K gamma 4) (EC 2.7.1.67) (Ubiquitin-like domain kinase gamma 4) (UbDK gamma 4)
Scaffold_122 322415 A G 19 37.77 exon Transition 0/1 GDP-L-galactose phosphorylase 1 (EC 2.7.7.69) (Protein VITAMIN C DEFECTIVE ... more
GDP-L-galactose phosphorylase 1 (EC 2.7.7.69) (Protein VITAMIN C DEFECTIVE 2)
Scaffold_122 361774 C T 11 61.77 CDS Transition 0/1 Unannotated
Scaffold_122 402697 A G 28 320.77 CDS Transition 0/1 Linoleate 13S-lipoxygenase 2-1, chloroplastic (EC 1.13.11.12) (Lipoxygenase... more
Linoleate 13S-lipoxygenase 2-1, chloroplastic (EC 1.13.11.12) (Lipoxygenase 2-1)
Scaffold_122 418202 G A 13 73.77 exon Transition 0/1 PP2A regulatory subunit TAP46
Scaffold_123 311366 T C 88 153.77 exon Transition 0/1 Unannotated
Scaffold_123 408286 C T 24 222.77 exon Transition 0/1 G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 (EC 2.7... more
G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 (EC 2.7.11.1) (Receptor-like kinase 4) (S-domain-2 (SD2) receptor kinase 2) (SD2-2)
Scaffold_123 465894 T C 54 128.77 CDS Transition 0/1 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 (EC... more
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 (EC 2.1.1.14) (Cobalamin-independent methionine synthase 1) (AtMS1) (Vitamin-B12-independent methionine synthase 1)
Scaffold_123 478993 C T 17 55.77 CDS Transition 0/1 Unannotated
Scaffold_124 209643 T C 23 90.77 exon Transition 0/1 Unannotated
Scaffold_125 77228 G A 72 156.77 intron Transition 0/1 Unannotated
Scaffold_125 80362 A G 250 785.77 exon Transition 0/1 Unannotated
Scaffold_126 88363 T C 14 89.77 exon Transition 0/1 Unannotated
Scaffold_126 166086 A G 39 41.77 CDS Transition 0/1 Unannotated
Scaffold_126 233751 A G 13 70.77 exon Transition 0/1 Unannotated