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M-83 SNPs

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Total record count: 7933.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_2495 104337 T C 19 58.77 exon Transition 0/1 U-box domain-containing protein 30 (EC 2.3.2.27) (Plant U-box protein 30) (... more
U-box domain-containing protein 30 (EC 2.3.2.27) (Plant U-box protein 30) (RING-type E3 ubiquitin transferase PUB30)
Scaffold_2498 49868 G A 15 73.77 exon Transition 0/1 Unannotated
Scaffold_2498 105731 T C 14 155.77 exon Transition 0/1 Transcription termination factor MTERF15, mitochondrial (Mitochondrial tran... more
Transcription termination factor MTERF15, mitochondrial (Mitochondrial transcription termination factor 15)
Scaffold_2498 105758 G A 10 82.77 exon Transition 0/1 Transcription termination factor MTERF15, mitochondrial (Mitochondrial tran... more
Transcription termination factor MTERF15, mitochondrial (Mitochondrial transcription termination factor 15)
Scaffold_2498 106032 G A 11 64.77 exon Transition 0/1 Transcription termination factor MTERF15, mitochondrial (Mitochondrial tran... more
Transcription termination factor MTERF15, mitochondrial (Mitochondrial transcription termination factor 15)
Scaffold_2500 11624 C T 12 64.77 noncoding Transition 0/1 Unannotated
Scaffold_2500 56660 T C 28 644.77 exon Transition 0/1 Unannotated
Scaffold_2500 56661 T C 25 587.77 exon Transition 0/1 Unannotated
Scaffold_2501 69882 A G 32 254.77 CDS Transition 0/1 Unannotated
Scaffold_2501 71852 A G 24 46.77 CDS Transition 0/1 Unannotated
Scaffold_2501 78028 T C 17 80.77 exon Transition 0/1 Protein disulfide isomerase-like 2-2 (OsPDIL2-2) (EC 5.3.4.1) (Protein disu... more
Protein disulfide isomerase-like 2-2 (OsPDIL2-2) (EC 5.3.4.1) (Protein disulfide isomerase-like 4-2) (OsPDIL4-2)
Scaffold_2502 85041 A G 22 30.77 CDS Transition 0/1 Unannotated
Scaffold_2505 5251 G A 10 55.77 CDS Transition 0/1 SART-1 family protein DOT2 (Protein DEFECTIVELY ORGANIZED TRIBUTARIES 2) (P... more
SART-1 family protein DOT2 (Protein DEFECTIVELY ORGANIZED TRIBUTARIES 2) (Protein MERISTEM-DEFECTIVE)
Scaffold_2505 47960 T C 40 33.77 CDS Transition 0/1 CBS domain-containing protein CBSX5
Scaffold_2506 33450 T C 15 46.77 exon Transition 0/1 Adenylosuccinate synthetase 2, chloroplastic (AMPSase 2) (AdSS 2) (EC 6.3.4... more
Adenylosuccinate synthetase 2, chloroplastic (AMPSase 2) (AdSS 2) (EC 6.3.4.4) (IMP--aspartate ligase 2)
Scaffold_2506 65073 G A 13 61.77 exon Transition 0/1 Probable galacturonosyltransferase-like 3 (EC 2.4.1.-)
Scaffold_2507 13884 G A 19 37.77 exon Transition 0/1 Unannotated
Scaffold_2507 107404 A G 97 108.77 CDS Transition 0/1 Unannotated
Scaffold_2519 104764 A G 14 43.77 exon Transition 0/1 Unannotated
Scaffold_2519 105132 C T 12 320.77 intron Transition 0/1 Unannotated

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