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  3. RGC-1066 SNPs

RGC-1066 SNPs

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Total record count: 10279.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_16 1256707 C T 10 346.78 exon Transition 1/1 Berberine bridge enzyme-like 13 (AtBBE-like 13) (EC 1.1.1.194) (EC 1.1.1.19... more
Berberine bridge enzyme-like 13 (AtBBE-like 13) (EC 1.1.1.194) (EC 1.1.1.195)
Scaffold_57 1338026 G A 13 364.22 intron Transition 0/1 Beta-galactosidase 1 (Lactase 1) (EC 3.2.1.23)
Scaffold_57 1339462 T C 30 801.77 CDS Transition 0/1 Beta-galactosidase 1 (Lactase 1) (EC 3.2.1.23)
Scaffold_148 151349 A G 23 700.77 intron Transition 1/1 Beta-glucosidase 44 (AtBGLU44) (EC 3.2.1.21)
Scaffold_296 22254 G A 112 2595.77 noncoding Transition 0/1 BTB/POZ domain-containing protein At2g30600
Scaffold_296 22335 T C 81 65.77 noncoding Transition 0/1 BTB/POZ domain-containing protein At2g30600
Scaffold_296 24653 G A 140 31.77 exon Transition 0/1 BTB/POZ domain-containing protein At2g30600
Scaffold_296 24784 G A 93 1872.77 exon Transition 0/1 BTB/POZ domain-containing protein At2g30600
Scaffold_296 24787 C T 95 1903.77 exon Transition 0/1 BTB/POZ domain-containing protein At2g30600
Scaffold_296 25054 T C 46 81.77 exon Transition 0/1 BTB/POZ domain-containing protein At2g30600
Scaffold_296 25072 T C 46 112.77 exon Transition 0/1 BTB/POZ domain-containing protein At2g30600
Scaffold_296 25318 T C 28 838.96 exon Transition 0/1 BTB/POZ domain-containing protein At2g30600
Scaffold_741 7525 G A 27 919.77 CDS Transition 1/1 BTB/POZ domain-containing protein At5g66560
Scaffold_741 8508 C T 17 574.77 CDS Transition 1/1 BTB/POZ domain-containing protein At5g66560
Scaffold_173 567053 A G 24 723.77 CDS Transition 1/1 Calcium-dependent protein kinase (CDPK) (EC 2.7.11.1)
Scaffold_181 425670 G A 54 1677.77 CDS Transition 0/1 Calcium-dependent protein kinase 1 (OsCDPK1) (OsCPK1) (EC 2.7.11.1)
Scaffold_41 925305 T C 10 256.8 CDS Transition 1/1 Calcium-dependent protein kinase 11 (EC 2.7.11.1) (Calcium-dependent protei... more
Calcium-dependent protein kinase 11 (EC 2.7.11.1) (Calcium-dependent protein kinase isoform CDPK2) (AtCDPK2)
Scaffold_58 737152 A G 12 49.77 CDS Transition 0/1 Calmodulin-binding transcription activator 4 (AtCAMTA4) (AtFIN21) (Ethylene... more
Calmodulin-binding transcription activator 4 (AtCAMTA4) (AtFIN21) (Ethylene-induced calmodulin-binding protein 4) (EICBP4) (Ethylene-induced calmodulin-binding protein d) (EICBP.d) (Signal-responsive protein 5) (AtSR5)
Scaffold_51 428396 T C 19 564.88 intron Transition 0/1 Calnexin homolog
Scaffold_523 49264 G A 234 8063.77 CDS Transition 1/1 Calnexin homolog

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