2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_335 52703 G C 48 486.77 exon Transversion 0/1 Unannotated
Scaffold_335 52814 T A 38 174.77 exon Transversion 0/1 Unannotated
Scaffold_335 66851 T G 10 154.77 noncoding Transversion 0/1 Unannotated
Scaffold_336 30924 A T 73 219.77 exon Transversion 0/1 Unannotated
Scaffold_337 5383 A C 22 43.77 exon Transversion 0/1 Unannotated
Scaffold_337 5436 C A 18 469.77 exon Transversion 0/1 Unannotated
Scaffold_338 51799 C A 14 217.77 exon Transversion 0/1 Probable zinc metalloprotease EGY2, chloroplastic (EC 3.4.24.-) (Protein ET... more
Probable zinc metalloprotease EGY2, chloroplastic (EC 3.4.24.-) (Protein ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN 2)
Scaffold_338 51918 T G 18 301.77 intron Transversion 0/1 Probable zinc metalloprotease EGY2, chloroplastic (EC 3.4.24.-) (Protein ET... more
Probable zinc metalloprotease EGY2, chloroplastic (EC 3.4.24.-) (Protein ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN 2)
Scaffold_341 30426 A T 18 274.77 exon Transversion 0/1 Unannotated
Scaffold_341 31515 T G 96 89.77 CDS Transversion 0/1 Unannotated
Scaffold_346 57358 T A 13 138.77 intron Transversion 0/1 Probable LRR receptor-like serine/threonine-protein kinase At1g56140 (EC 2.... more
Probable LRR receptor-like serine/threonine-protein kinase At1g56140 (EC 2.7.11.1)
Scaffold_349 6349 T A 18 314.77 CDS Transversion 0/1 Protein TOC75-3, chloroplastic (75 kDa translocon at the outer-envelope-mem... more
Protein TOC75-3, chloroplastic (75 kDa translocon at the outer-envelope-membrane of chloroplasts 3) (AtTOC75-III)
Scaffold_349 6368 T A 28 86.77 CDS Transversion 0/1 Protein TOC75-3, chloroplastic (75 kDa translocon at the outer-envelope-mem... more
Protein TOC75-3, chloroplastic (75 kDa translocon at the outer-envelope-membrane of chloroplasts 3) (AtTOC75-III)
Scaffold_349 36658 G C 73 939.77 exon Transversion 0/1 Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyropho... more
Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase)
Scaffold_349 36673 C A 67 375.77 exon Transversion 0/1 Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyropho... more
Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase)
Scaffold_349 36709 G T 19 97.77 exon Transversion 0/1 Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyropho... more
Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase)
Scaffold_352 58235 A T 11 218.77 CDS Transversion 0/1 Unannotated
Scaffold_355 15190 A C 22 292.77 noncoding Transversion 0/1 Unannotated
Scaffold_361 36233 T G 10 176.77 exon Transversion 0/1 Unannotated
Scaffold_368 5059 G C 31 384.77 intron Transversion 0/1 Unannotated

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