2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_64 1326685 A T 42 74.77 CDS Transversion 0/1 Probable serine/threonine-protein kinase At1g54610 (EC 2.7.11.1)
Scaffold_65 33832 T A 147 466.77 intron Transversion 0/1 Unannotated
Scaffold_65 33834 C G 219 1859.77 intron Transversion 0/1 Unannotated
Scaffold_65 34594 A C 111 608.77 intron Transversion 0/1 Unannotated
Scaffold_65 35318 A T 38 153.77 intron Transversion 0/1 Unannotated
Scaffold_65 166896 C G 75 1359.77 CDS Transversion 0/1 Unannotated
Scaffold_65 166932 T G 50 345.77 CDS Transversion 0/1 Unannotated
Scaffold_65 209499 A C 14 264.77 exon Transversion 0/1 Unannotated
Scaffold_65 383421 T G 116 117.77 CDS Transversion 0/1 Unannotated
Scaffold_65 516036 C A 39 41.77 exon Transversion 0/1 Unannotated
Scaffold_65 604613 C G 58 37.77 CDS Transversion 0/1 Alkaline ceramidase (AlkCDase) (Alkaline CDase) (AtACER) (EC 3.5.1.-) (Acyl... more
Alkaline ceramidase (AlkCDase) (Alkaline CDase) (AtACER) (EC 3.5.1.-) (Acyl-CoA independent ceramide synthase 1) (AtCES1) (Alkaline ceramidase YPC1) (AtYPC1) (Alkaline dihydroceramidase ACER) (Alkaline phytoceramidase) (aPHC)
Scaffold_65 915910 A T 10 128.53 intron Transversion 0/1 Hypersensitive-induced response protein 1 (AtHIR1)
Scaffold_65 1307677 T A 13 118.77 intron Transversion 0/1 Unannotated
Scaffold_65 1323406 T A 11 34.77 CDS Transversion 0/1 Ferrochelatase-1, chloroplastic/mitochondrial (AtFC1) (EC 4.99.1.1) (Ferroc... more
Ferrochelatase-1, chloroplastic/mitochondrial (AtFC1) (EC 4.99.1.1) (Ferrochelatase-I) (AtFC-I) (Heme synthase 1) (Protoheme ferro-lyase 1)
Scaffold_65 1323410 A C 11 43.77 CDS Transversion 0/1 Ferrochelatase-1, chloroplastic/mitochondrial (AtFC1) (EC 4.99.1.1) (Ferroc... more
Ferrochelatase-1, chloroplastic/mitochondrial (AtFC1) (EC 4.99.1.1) (Ferrochelatase-I) (AtFC-I) (Heme synthase 1) (Protoheme ferro-lyase 1)
Scaffold_65 1352579 A T 27 31.77 intron Transversion 0/1 Unannotated
Scaffold_65 1447262 T G 18 94.77 noncoding Transversion 0/1 Unannotated
Scaffold_65 1473305 C G 22 323.77 CDS Transversion 0/1 Unannotated
Scaffold_66 97787 T G 20 62.77 exon Transversion 0/1 Unannotated
Scaffold_66 197734 C A 47 69.77 intron Transversion 0/1 Unannotated

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