2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_1525 16852 C A 17 305.77 intron Transversion 0/1 Unannotated
Scaffold_1530 27201 C G 28 58.77 exon Transversion 0/1 Serine carboxypeptidase-like 41 (EC 3.4.16.-)
Scaffold_1538 44892 C A 54 1171.77 noncoding Transversion 0/1 Unannotated
Scaffold_1544 14254 G C 20 283.77 intron Transversion 0/1 Unannotated
Scaffold_1556 33793 A C 40 40.77 noncoding Transversion 0/1 Unannotated
Scaffold_1576 26490 T G 36 639.77 noncoding Transversion 0/1 Unannotated
Scaffold_1582 30948 A T 61 100.77 noncoding Transversion 0/1 UDP-glycosyltransferase 74F2 (EC 2.4.1.-) (AtSGT1) (Salicylic acid glucosyl... more
UDP-glycosyltransferase 74F2 (EC 2.4.1.-) (AtSGT1) (Salicylic acid glucosyltransferase 1)
Scaffold_1582 30949 A C 61 1485.77 noncoding Transversion 0/1 UDP-glycosyltransferase 74F2 (EC 2.4.1.-) (AtSGT1) (Salicylic acid glucosyl... more
UDP-glycosyltransferase 74F2 (EC 2.4.1.-) (AtSGT1) (Salicylic acid glucosyltransferase 1)
Scaffold_1583 39507 A C 13 260.77 noncoding Transversion 0/1 Unannotated
Scaffold_1587 41769 T A 15 110.77 intron Transversion 0/1 Unannotated
Scaffold_1587 42642 T A 10 218.77 noncoding Transversion 0/1 Unannotated
Scaffold_1602 42218 A C 13 279.89 noncoding Transversion 0/1 Unannotated
Scaffold_1602 42393 A T 14 311.77 noncoding Transversion 0/1 Unannotated
Scaffold_1609 26894 A T 10 188.77 intron Transversion 0/1 Unannotated
Scaffold_1625 31175 G C 10 88.77 noncoding Transversion 0/1 Unannotated
Scaffold_1647 2810 C A 18 42.77 exon Transversion 0/1 Unannotated
Scaffold_1648 43630 T A 21 44.77 noncoding Transversion 0/1 Unannotated
Scaffold_1649 32487 C A 100 205.77 exon Transversion 0/1 Unannotated
Scaffold_1654 40752 A T 112 1208.77 noncoding Transversion 0/1 Expansin-A5 (AtEXPA5) (Alpha-expansin-5) (At-EXP5) (AtEx5) (Ath-ExpAlpha-1.... more
Expansin-A5 (AtEXPA5) (Alpha-expansin-5) (At-EXP5) (AtEx5) (Ath-ExpAlpha-1.4)
Scaffold_1665 19751 T A 78 71.77 CDS Transversion 0/1 Unannotated

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