2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_2442 107085 A T 31 318.77 intron Transversion 0/1 Unannotated
Scaffold_2445 9947 C G 28 97.77 noncoding Transversion 0/1 Unannotated
Scaffold_2445 10064 G T 24 118.77 noncoding Transversion 0/1 Unannotated
Scaffold_2445 10106 T G 42 970.77 noncoding Transversion 0/1 Unannotated
Scaffold_2445 10191 C A 47 119.77 noncoding Transversion 0/1 Unannotated
Scaffold_2446 23225 T G 19 109.77 intron Transversion 0/1 Cationic amino acid transporter 2, vacuolar
Scaffold_2446 56686 T G 11 103.77 intron Transversion 0/1 Unannotated
Scaffold_2446 57043 C A 14 327.77 intron Transversion 0/1 Unannotated
Scaffold_2449 95329 T G 61 64.77 CDS Transversion 0/1 Phosphatase IMPL1, chloroplastic (EC 3.1.3.25) (Protein MYO-INOSITOL MONOPH... more
Phosphatase IMPL1, chloroplastic (EC 3.1.3.25) (Protein MYO-INOSITOL MONOPHOSPHATASE-LIKE 1)
Scaffold_2451 19453 A C 250 836.77 noncoding Transversion 0/1 Unannotated
Scaffold_2451 19777 A C 250 410.77 CDS Transversion 0/1 Unannotated
Scaffold_2451 20155 A C 249 279.77 CDS Transversion 0/1 Unannotated
Scaffold_2451 20320 A T 250 162.77 CDS Transversion 0/1 Unannotated
Scaffold_2451 20721 C G 41 300.77 intron Transversion 0/1 Unannotated
Scaffold_2451 20810 G T 23 259.77 intron Transversion 0/1 Unannotated
Scaffold_2451 20811 C G 24 145.77 intron Transversion 0/1 Unannotated
Scaffold_2451 20906 T A 96 1953.77 intron Transversion 0/1 Unannotated
Scaffold_2451 21015 A T 29 765.78 intron Transversion 0/1 Unannotated
Scaffold_2452 54231 G T 18 361.77 intron Transversion 0/1 Unannotated
Scaffold_2453 1828 A T 13 65.77 CDS Transversion 0/1 PAP-specific phosphatase HAL2-like (3'(2'),5'-bisphosphate nucleotidase) (E... more
PAP-specific phosphatase HAL2-like (3'(2'),5'-bisphosphate nucleotidase) (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) (Halotolerance protein)

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