Rgc-936 Snps

	SNP Id	Position	Reference Allele	Alternate Allele	DP	Quality	Located At	Type	Genotype	Function
	Scaffold_29	1199737	G	A	81	193.77	noncoding	Transition	0/1	Unannotated
	Scaffold_29	1199796	A	G	85	1427.77	noncoding	Transition	0/1	Unannotated
	Scaffold_30	441828	T	C	79	1281.77	CDS	Transition	0/1	Unannotated
	Scaffold_30	532940	T	C	14	100.77	CDS	Transition	0/1	Unannotated
	Scaffold_30	673011	G	A	64	755.77	CDS	Transition	0/1	Unannotated
	Scaffold_30	693037	C	T	14	238.77	exon	Transition	0/1	Unannotated
	Scaffold_30	865396	G	A	32	336.77	intron	Transition	0/1	Unannotated
	Scaffold_30	942595	T	C	250	308.77	exon	Transition	0/1	Unannotated
	Scaffold_30	942600	T	C	242	346.77	exon	Transition	0/1	Unannotated
	Scaffold_30	1037896	G	A	10	57.77	noncoding	Transition	0/1	Pentatricopeptide repeat-containing protein At4g18840
	Scaffold_30	1039213	T	C	22	51.77	exon	Transition	0/1	Pentatricopeptide repeat-containing protein At2g22410, mitochondrial
	Scaffold_30	1130216	G	A	49	345.77	exon	Transition	0/1	Unannotated
	Scaffold_30	1207949	C	T	36	833.22	intron	Transition	0/1	Unannotated
	Scaffold_30	1208073	A	G	17	243.77	intron	Transition	0/1	Unannotated
	Scaffold_30	1220788	G	A	11	39.77	CDS	Transition	0/1	Unannotated
	Scaffold_30	1232420	G	A	23	156.77	CDS	Transition	0/1	ATP synthase subunit beta, chloroplastic (EC 3.6.3.14) (ATP synthase F1 sec... more ATP synthase subunit beta, chloroplastic (EC 3.6.3.14) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta)
	Scaffold_30	1609399	T	C	177	31.77	CDS	Transition	0/1	Unannotated
	Scaffold_30	1609414	C	T	196	76.77	CDS	Transition	0/1	Unannotated
	Scaffold_30	1613227	G	A	122	1200.77	CDS	Transition	0/1	Unannotated
	Scaffold_30	1647138	A	G	98	154.77	CDS	Transition	0/1	Unannotated
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