2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_3155 43885 G T 131 572.77 intron Transversion 0/1 Unannotated
Scaffold_3156 2043 A C 116 1294.77 noncoding Transversion 0/1 Unannotated
Scaffold_3156 2045 G T 139 440.77 noncoding Transversion 0/1 Unannotated
Scaffold_3160 22014 A T 110 161.77 exon Transversion 0/1 Unannotated
Scaffold_3160 22431 C A 123 2531.77 exon Transversion 0/1 Unannotated
Scaffold_3160 23527 C G 12 56.77 noncoding Transversion 0/1 Unannotated
Scaffold_3162 42838 A T 13 110.77 CDS Transversion 0/1 Unannotated
Scaffold_3166 51209 A C 18 300.77 exon Transversion 0/1 Unannotated
Scaffold_3166 51282 T A 21 81.77 exon Transversion 0/1 Unannotated
Scaffold_3166 51283 A T 21 460.77 exon Transversion 0/1 Unannotated
Scaffold_3166 52161 A T 22 309.77 CDS Transversion 0/1 Unannotated
Scaffold_3167 44681 G C 18 309.77 intron Transversion 0/1 Unannotated
Scaffold_3167 44810 T G 15 157.77 intron Transversion 0/1 Unannotated
Scaffold_3167 44869 A C 89 550.77 CDS Transversion 0/1 Flavin mononucleotide hydrolase 1, chloroplatic (AtcpFHy1) (EC 3.1.3.102) (... more
Flavin mononucleotide hydrolase 1, chloroplatic (AtcpFHy1) (EC 3.1.3.102) (5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase) (AtcpFHy1/PyrP1) (EC 3.1.3.104) (5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione 5'-phosphate phosphatase) (ARPP phosphata
Scaffold_3167 45113 T A 14 315.77 intron Transversion 0/1 Unannotated
Scaffold_3172 18319 G T 17 108.77 noncoding Transversion 0/1 Adenylate kinase 2, chloroplastic (AK 2) (EC 2.7.4.3) (ATP-AMP transphospho... more
Adenylate kinase 2, chloroplastic (AK 2) (EC 2.7.4.3) (ATP-AMP transphosphorylase 2) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase 2) (AMK2)
Scaffold_3177 26700 A T 97 944.77 exon Transversion 0/1 Unannotated
Scaffold_3177 26787 G T 21 95.77 exon Transversion 0/1 Unannotated
Scaffold_3177 26804 A C 16 108.77 exon Transversion 0/1 Unannotated
Scaffold_3180 32892 A T 250 2448.77 noncoding Transversion 0/1 Unannotated

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