2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_3180 33336 A C 250 40.77 noncoding Transversion 0/1 Unannotated
Scaffold_3180 33338 G C 250 93.77 noncoding Transversion 0/1 Unannotated
Scaffold_3187 18249 T A 69 454.77 CDS Transversion 0/1 Unannotated
Scaffold_3192 77 A T 250 355.77 noncoding Transversion 0/1 Unannotated
Scaffold_3196 12827 T G 97 261.82 noncoding Transversion 0/1 Unannotated
Scaffold_3200 7782 T G 25 567.77 intron Transversion 0/1 Unannotated
Scaffold_3203 28062 C A 27 83.77 exon Transversion 0/1 Unannotated
Scaffold_3203 28127 T A 11 76.77 exon Transversion 0/1 Unannotated
Scaffold_3203 28128 T A 11 76.77 exon Transversion 0/1 Unannotated
Scaffold_3213 20357 A C 250 426.77 noncoding Transversion 0/1 Unannotated
Scaffold_3213 20371 G T 250 1436.77 noncoding Transversion 0/1 Unannotated
Scaffold_3221 36318 C A 28 79.77 CDS Transversion 0/1 Unannotated
Scaffold_3221 36346 A T 14 264.77 CDS Transversion 0/1 Unannotated
Scaffold_3221 36347 G T 14 258.77 CDS Transversion 0/1 Unannotated
Scaffold_3244 18148 A T 73 109.77 noncoding Transversion 0/1 Unannotated
Scaffold_3244 18253 A C 250 114.77 noncoding Transversion 0/1 Unannotated
Scaffold_3257 30704 C G 20 179.77 CDS Transversion 0/1 Unannotated
Scaffold_3259 15885 A T 25 543.77 CDS Transversion 0/1 7-deoxyloganetin glucosyltransferase (EC 2.4.1.324) (Genipin glucosyltransf... more
7-deoxyloganetin glucosyltransferase (EC 2.4.1.324) (Genipin glucosyltransferase) (UDP-glucose glucosyltransferase 2) (GjUGT2) (UDP-glycosyltransferase 85A24)
Scaffold_3259 15961 C A 82 2023.77 CDS Transversion 0/1 7-deoxyloganetin glucosyltransferase (EC 2.4.1.324) (Genipin glucosyltransf... more
7-deoxyloganetin glucosyltransferase (EC 2.4.1.324) (Genipin glucosyltransferase) (UDP-glucose glucosyltransferase 2) (GjUGT2) (UDP-glycosyltransferase 85A24)
Scaffold_3266 21158 T G 39 142.77 exon Transversion 0/1 Pentatricopeptide repeat-containing protein At1g71460, chloroplastic

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