2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_325 27425 T C 250 119.77 CDS Transition 0/1 Unannotated
Scaffold_325 76949 T C 35 395.77 CDS Transition 0/1 Unannotated
Scaffold_327 7427 T C 27 728.89 exon Transition 0/1 Unannotated
Scaffold_329 28179 T C 20 322.77 CDS Transition 0/1 Unannotated
Scaffold_332 9493 T C 23 56.77 noncoding Transition 0/1 Unannotated
Scaffold_335 43256 T C 249 3695.77 noncoding Transition 0/1 Cellulose synthase A catalytic subunit 1 [UDP-forming] (AtCesA1) (EC 2.4.1.... more
Cellulose synthase A catalytic subunit 1 [UDP-forming] (AtCesA1) (EC 2.4.1.12) (Protein RADIALLY SWOLLEN 1) (AtRSW1)
Scaffold_335 43259 G A 247 4033.77 noncoding Transition 0/1 Cellulose synthase A catalytic subunit 1 [UDP-forming] (AtCesA1) (EC 2.4.1.... more
Cellulose synthase A catalytic subunit 1 [UDP-forming] (AtCesA1) (EC 2.4.1.12) (Protein RADIALLY SWOLLEN 1) (AtRSW1)
Scaffold_335 43286 C T 245 276.77 noncoding Transition 0/1 Cellulose synthase A catalytic subunit 1 [UDP-forming] (AtCesA1) (EC 2.4.1.... more
Cellulose synthase A catalytic subunit 1 [UDP-forming] (AtCesA1) (EC 2.4.1.12) (Protein RADIALLY SWOLLEN 1) (AtRSW1)
Scaffold_335 52393 C T 62 292.77 exon Transition 0/1 Unannotated
Scaffold_335 52514 T C 16 182.77 exon Transition 0/1 Unannotated
Scaffold_335 52561 A G 32 641.77 exon Transition 0/1 Unannotated
Scaffold_335 52575 A G 32 158.77 exon Transition 0/1 Unannotated
Scaffold_335 52581 T C 29 61.77 exon Transition 0/1 Unannotated
Scaffold_335 52791 C T 40 604.77 exon Transition 0/1 Unannotated
Scaffold_335 52822 C T 37 66.77 exon Transition 0/1 Unannotated
Scaffold_336 31457 G A 54 171.77 CDS Transition 0/1 Unannotated
Scaffold_337 5284 T C 12 122.77 exon Transition 0/1 Unannotated
Scaffold_337 5415 C T 19 344.77 exon Transition 0/1 Unannotated
Scaffold_338 52462 G A 60 143.77 intron Transition 0/1 Probable zinc metalloprotease EGY2, chloroplastic (EC 3.4.24.-) (Protein ET... more
Probable zinc metalloprotease EGY2, chloroplastic (EC 3.4.24.-) (Protein ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN 2)
Scaffold_338 53854 C T 103 155.77 intron Transition 0/1 Unannotated

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