2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_3763 3718 T C 217 4911.77 exon Transition 0/1 Unannotated
Scaffold_3763 3735 A G 12 69.77 exon Transition 0/1 Unannotated
Scaffold_3763 3751 G A 16 127.77 exon Transition 0/1 Unannotated
Scaffold_3763 37575 T C 101 1990.77 CDS Transition 0/1 UDP-rhamnose/UDP-galactose transporter 1 (UDP-Rha/UDP-Gal transporter 1) (U... more
UDP-rhamnose/UDP-galactose transporter 1 (UDP-Rha/UDP-Gal transporter 1) (UDP-galactose transporter 2) (At-UDP-GalT2)
Scaffold_3763 37587 A G 156 2706.77 CDS Transition 0/1 UDP-rhamnose/UDP-galactose transporter 1 (UDP-Rha/UDP-Gal transporter 1) (U... more
UDP-rhamnose/UDP-galactose transporter 1 (UDP-Rha/UDP-Gal transporter 1) (UDP-galactose transporter 2) (At-UDP-GalT2)
Scaffold_3763 37692 T C 74 331.77 CDS Transition 0/1 UDP-rhamnose/UDP-galactose transporter 1 (UDP-Rha/UDP-Gal transporter 1) (U... more
UDP-rhamnose/UDP-galactose transporter 1 (UDP-Rha/UDP-Gal transporter 1) (UDP-galactose transporter 2) (At-UDP-GalT2)
Scaffold_3763 38914 C T 197 809.77 CDS Transition 0/1 UDP-rhamnose/UDP-galactose transporter 1 (UDP-Rha/UDP-Gal transporter 1) (U... more
UDP-rhamnose/UDP-galactose transporter 1 (UDP-Rha/UDP-Gal transporter 1) (UDP-galactose transporter 2) (At-UDP-GalT2)
Scaffold_3770 57198 A G 13 297.77 noncoding Transition 0/1 Unannotated
Scaffold_3771 12503 T C 31 309.77 CDS Transition 0/1 Probable LRR receptor-like serine/threonine-protein kinase At2g16250 (EC 2.... more
Probable LRR receptor-like serine/threonine-protein kinase At2g16250 (EC 2.7.11.1)
Scaffold_3771 13002 G A 83 1007.77 CDS Transition 0/1 Unannotated
Scaffold_3771 13030 T C 50 305.77 exon Transition 0/1 Unannotated
Scaffold_3771 13465 C T 10 236.98 noncoding Transition 0/1 Unannotated
Scaffold_3771 13484 C T 13 116.77 noncoding Transition 0/1 Unannotated
Scaffold_3771 13579 G A 21 227.77 noncoding Transition 0/1 Unannotated
Scaffold_3783 20395 C T 68 877.77 noncoding Transition 0/1 Unannotated
Scaffold_3783 20451 T C 70 300.77 noncoding Transition 0/1 Unannotated
Scaffold_3783 20460 A G 89 844.77 noncoding Transition 0/1 Unannotated
Scaffold_3784 50587 C T 68 156.77 noncoding Transition 0/1 Unannotated
Scaffold_3789 20401 G A 153 207.77 CDS Transition 0/1 T-complex protein 1 subunit theta (TCP-1-theta) (CCT-theta) (Chaperonin CCT... more
T-complex protein 1 subunit theta (TCP-1-theta) (CCT-theta) (Chaperonin CCT8) (Chaperonin containing TCP1 8) (TCP1-ring complex)
Scaffold_3789 20458 C T 250 1829.77 CDS Transition 0/1 T-complex protein 1 subunit theta (TCP-1-theta) (CCT-theta) (Chaperonin CCT... more
T-complex protein 1 subunit theta (TCP-1-theta) (CCT-theta) (Chaperonin CCT8) (Chaperonin containing TCP1 8) (TCP1-ring complex)

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