2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_3516 68293 T C 150 3552.77 CDS Transition 0/1 Unannotated
Scaffold_3516 68326 G A 124 767.77 CDS Transition 0/1 Unannotated
Scaffold_3516 68398 T C 43 226.77 CDS Transition 0/1 Unannotated
Scaffold_3528 2494 C T 14 142.77 noncoding Transition 0/1 ABC transporter C family member 8 (ABC transporter ABCC.8) (AtABCC8) (EC 3.... more
ABC transporter C family member 8 (ABC transporter ABCC.8) (AtABCC8) (EC 3.6.3.44) (ATP-energized glutathione S-conjugate pump 6) (Glutathione S-conjugate-transporting ATPase 6) (Multidrug resistance-associated protein 6)
Scaffold_3536 24031 T C 60 729.77 CDS Transition 0/1 Unannotated
Scaffold_3536 24040 G A 58 657.77 CDS Transition 0/1 Unannotated
Scaffold_3536 24616 G A 35 350.77 CDS Transition 0/1 Unannotated
Scaffold_3536 24618 G A 34 295.77 CDS Transition 0/1 Unannotated
Scaffold_3536 24872 T C 28 441.77 CDS Transition 0/1 Unannotated
Scaffold_3536 34097 A G 223 1528.77 exon Transition 0/1 Unannotated
Scaffold_3538 30703 T C 11 80.77 noncoding Transition 0/1 Unannotated
Scaffold_3542 28859 T C 29 162.77 intron Transition 0/1 Unannotated
Scaffold_3542 28889 G A,C 12 377.77 CDS Transition 1/2 Unannotated
Scaffold_3544 3033 C T 22 422.77 CDS Transition 0/1 RNA polymerase II C-terminal domain phosphatase-like 1 (FCP-like 1) (EC 3.1... more
RNA polymerase II C-terminal domain phosphatase-like 1 (FCP-like 1) (EC 3.1.3.16) (Carboxyl-terminal phosphatase-like 1) (AtCPL1) (CTD phosphatase-like 1) (Protein FIERY 2) (Protein JASMONATE OVEREXPRESSING 1) (Protein SHINY 4)
Scaffold_3544 3146 C T 47 869.77 CDS Transition 0/1 RNA polymerase II C-terminal domain phosphatase-like 1 (FCP-like 1) (EC 3.1... more
RNA polymerase II C-terminal domain phosphatase-like 1 (FCP-like 1) (EC 3.1.3.16) (Carboxyl-terminal phosphatase-like 1) (AtCPL1) (CTD phosphatase-like 1) (Protein FIERY 2) (Protein JASMONATE OVEREXPRESSING 1) (Protein SHINY 4)
Scaffold_3544 43472 A G 21 507.77 intron Transition 0/1 Unannotated
Scaffold_3545 8501 G A,C 39 4100.77 noncoding Transition 1/2 Unannotated
Scaffold_3545 8509 T C 248 272.77 noncoding Transition 0/1 Unannotated
Scaffold_3545 8540 T C 248 4011.77 noncoding Transition 0/1 Unannotated
Scaffold_3545 8560 C T 250 422.77 noncoding Transition 0/1 Unannotated

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