2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_2463 61548 G A 39 273.77 exon Transition 0/1 Unannotated
Scaffold_2463 61593 C T 20 410.77 exon Transition 0/1 Unannotated
Scaffold_2463 62802 A G 11 50.77 exon Transition 0/1 Unannotated
Scaffold_2463 116739 G A 12 98.77 intron Transition 0/1 Unannotated
Scaffold_2465 9064 T C 19 73.77 CDS Transition 0/1 Unannotated
Scaffold_2468 36565 G A,T 117 6518.77 noncoding Transition 1/2 Unannotated
Scaffold_2468 36598 T C 57 873.77 noncoding Transition 0/1 Unannotated
Scaffold_2468 54043 G A 12 43.77 noncoding Transition 0/1 Unannotated
Scaffold_2468 76947 G A 13 234.77 noncoding Transition 0/1 Unannotated
Scaffold_2470 28418 T C 33 727.77 CDS Transition 0/1 Unannotated
Scaffold_2472 108399 C T 16 69.77 noncoding Transition 0/1 Unannotated
Scaffold_2473 96721 A G 66 246.77 noncoding Transition 0/1 Unannotated
Scaffold_2474 57913 T C 70 55.77 CDS Transition 0/1 Calcium-dependent protein kinase 19 (OsCDPK19) (OsCPK19) (EC 2.7.11.1) (Cal... more
Calcium-dependent protein kinase 19 (OsCDPK19) (OsCPK19) (EC 2.7.11.1) (Calcium-dependent protein kinase isoform 2) (OsCDPK2) (OsCPK2)
Scaffold_2474 57940 A G 70 92.77 CDS Transition 0/1 Calcium-dependent protein kinase 19 (OsCDPK19) (OsCPK19) (EC 2.7.11.1) (Cal... more
Calcium-dependent protein kinase 19 (OsCDPK19) (OsCPK19) (EC 2.7.11.1) (Calcium-dependent protein kinase isoform 2) (OsCDPK2) (OsCPK2)
Scaffold_2474 59101 A G 16 297.77 intron Transition 0/1 Unannotated
Scaffold_2474 60870 A G 18 117.77 intron Transition 0/1 Calcium-dependent protein kinase 19 (OsCDPK19) (OsCPK19) (EC 2.7.11.1) (Cal... more
Calcium-dependent protein kinase 19 (OsCDPK19) (OsCPK19) (EC 2.7.11.1) (Calcium-dependent protein kinase isoform 2) (OsCDPK2) (OsCPK2)
Scaffold_2474 60886 T C 16 152.77 intron Transition 0/1 Calcium-dependent protein kinase 19 (OsCDPK19) (OsCPK19) (EC 2.7.11.1) (Cal... more
Calcium-dependent protein kinase 19 (OsCDPK19) (OsCPK19) (EC 2.7.11.1) (Calcium-dependent protein kinase isoform 2) (OsCDPK2) (OsCPK2)
Scaffold_2475 2599 T C 21 194.77 CDS Transition 0/1 Protein tesmin/TSO1-like CXC 5 (AtTCX5)
Scaffold_2475 2731 C T 36 103.77 CDS Transition 0/1 Protein tesmin/TSO1-like CXC 5 (AtTCX5)
Scaffold_2475 104500 A G 17 74.77 noncoding Transition 0/1 Unannotated

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