2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_1035 19875 C T 20 317.77 CDS Transition 0/1 Unannotated
Scaffold_1048 7128 C T 36 614.77 noncoding Transition 0/1 Unannotated
Scaffold_1048 52246 T C 24 105.77 noncoding Transition 0/1 Unannotated
Scaffold_1048 54269 G A 13 284.77 CDS Transition 0/1 Unannotated
Scaffold_1052 50831 A G 32 479.77 noncoding Transition 0/1 Cyclase-like protein 2 (OsCYL2)
Scaffold_1058 33059 T C 39 460.77 intron Transition 0/1 Unannotated
Scaffold_1058 33060 A G 18 59.77 intron Transition 0/1 Unannotated
Scaffold_1061 32526 A G 247 39.77 CDS Transition 0/1 Unannotated
Scaffold_1066 49970 T C 19 170.77 exon Transition 0/1 Uncharacterized acetyltransferase At3g50280 (EC 2.3.1.-)
Scaffold_1067 38949 C T 89 95.77 exon Transition 0/1 Unannotated
Scaffold_1067 38964 A G 92 138.77 exon Transition 0/1 Unannotated
Scaffold_1068 40703 A G 191 762.77 noncoding Transition 0/1 Unannotated
Scaffold_1072 15873 A G 93 392.77 noncoding Transition 0/1 Unannotated
Scaffold_1073 47050 G A 39 232.77 noncoding Transition 0/1 Cytochrome P450 82A4 (EC 1.14.-.-) (Cytochrome P450 CP9)
Scaffold_1073 47132 G A 74 419.77 noncoding Transition 0/1 Cytochrome P450 82A4 (EC 1.14.-.-) (Cytochrome P450 CP9)
Scaffold_1073 47176 G A 66 1200.77 noncoding Transition 0/1 Cytochrome P450 82A4 (EC 1.14.-.-) (Cytochrome P450 CP9)
Scaffold_1074 55692 A G 250 208.77 noncoding Transition 0/1 Unannotated
Scaffold_1074 56799 C T 19 62.77 noncoding Transition 0/1 Unannotated
Scaffold_1077 20371 T C 71 296.77 noncoding Transition 0/1 Unannotated
Scaffold_1078 25837 C T 61 484.77 CDS Transition 0/1 Unannotated

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