2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_1078 25929 C T 76 598.77 noncoding Transition 0/1 Unannotated
Scaffold_1080 825 A G 91 2035.77 exon Transition 0/1 Unannotated
Scaffold_1080 1319 G A 76 1840.77 exon Transition 0/1 Unannotated
Scaffold_1081 386 T C 61 880.77 intron Transition 0/1 Unannotated
Scaffold_1081 1337 T C 43 799.77 exon Transition 0/1 Peptidyl-prolyl cis-trans isomerase CYP20-1 (PPIase CYP20-1) (EC 5.2.1.8) (... more
Peptidyl-prolyl cis-trans isomerase CYP20-1 (PPIase CYP20-1) (EC 5.2.1.8) (Cyclophilin of 20 kDa 1) (Rotamase CYP20-1) (Rotamase cyclophilin-7)
Scaffold_1081 1338 G A 56 1110.77 exon Transition 0/1 Peptidyl-prolyl cis-trans isomerase CYP20-1 (PPIase CYP20-1) (EC 5.2.1.8) (... more
Peptidyl-prolyl cis-trans isomerase CYP20-1 (PPIase CYP20-1) (EC 5.2.1.8) (Cyclophilin of 20 kDa 1) (Rotamase CYP20-1) (Rotamase cyclophilin-7)
Scaffold_1081 1435 G A 24 241.77 exon Transition 0/1 Peptidyl-prolyl cis-trans isomerase CYP22 (PPIase CYP22) (EC 5.2.1.8) (Cycl... more
Peptidyl-prolyl cis-trans isomerase CYP22 (PPIase CYP22) (EC 5.2.1.8) (Cyclophilin of 22 kDa) (Cyclophilin-22)
Scaffold_1084 55819 T C 22 134.77 noncoding Transition 0/1 Unannotated
Scaffold_1084 55822 G A 25 229.77 noncoding Transition 0/1 Unannotated
Scaffold_1088 10019 T C 21 118.77 noncoding Transition 0/1 Nudix hydrolase 8 (AtNUDT8) (EC 3.6.1.-)
Scaffold_1088 10020 A G 22 139.77 noncoding Transition 0/1 Nudix hydrolase 8 (AtNUDT8) (EC 3.6.1.-)
Scaffold_1089 56845 T C 64 210.77 exon Transition 0/1 TMV resistance protein N
Scaffold_1099 18682 C T 13 113.77 exon Transition 0/1 Unannotated
Scaffold_1104 16698 A G 14 125.94 CDS Transition 0/1 Unannotated
Scaffold_1105 16540 A G 13 121.77 exon Transition 0/1 Unannotated
Scaffold_1109 8705 A G 12 171.77 noncoding Transition 0/1 Protein Asterix
Scaffold_1113 18369 A G,T 31 1707.77 noncoding Transition 1/2 Unannotated
Scaffold_1113 18370 G A 74 914.77 noncoding Transition 0/1 Unannotated
Scaffold_1114 50874 A G 20 67.77 exon Transition 0/1 Unannotated
Scaffold_1117 15649 A G 139 265.77 noncoding Transition 0/1 60S ribosomal protein L7-2

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