2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_1117 15757 A G 249 157.77 noncoding Transition 0/1 60S ribosomal protein L7-2
Scaffold_1118 18511 G A 93 187.77 exon Transition 0/1 Unannotated
Scaffold_1118 18520 T C 94 206.77 exon Transition 0/1 Unannotated
Scaffold_1118 18598 T C 41 531.77 exon Transition 0/1 Unannotated
Scaffold_1118 19298 G A 20 204.77 CDS Transition 0/1 Unannotated
Scaffold_1118 19988 C T 97 330.77 exon Transition 0/1 Unannotated
Scaffold_1120 53526 G A 13 195.77 CDS Transition 0/1 Probable uridine nucleosidase 2 (EC 3.2.2.3) (Uridine ribohydrolase 2)
Scaffold_1136 36244 C T 79 675.77 noncoding Transition 0/1 Unannotated
Scaffold_1139 3023 T C 195 180.77 CDS Transition 0/1 AP2/ERF and B3 domain-containing transcription repressor TEM1 (Protein TEMP... more
AP2/ERF and B3 domain-containing transcription repressor TEM1 (Protein TEMPRANILLO 1) (RAV1-like ethylene-responsive transcription factor TEM1)
Scaffold_1139 7060 C T 57 882.77 exon Transition 0/1 Unannotated
Scaffold_1148 37489 T C 245 1962.77 CDS Transition 0/1 Mitochondrial adenine nucleotide transporter ADNT1 (Adenine nucleotide tran... more
Mitochondrial adenine nucleotide transporter ADNT1 (Adenine nucleotide transporter 1)
Scaffold_1148 37533 C T 130 287.77 CDS Transition 0/1 Mitochondrial adenine nucleotide transporter ADNT1 (Adenine nucleotide tran... more
Mitochondrial adenine nucleotide transporter ADNT1 (Adenine nucleotide transporter 1)
Scaffold_1148 37560 A G 248 4753.77 CDS Transition 0/1 Mitochondrial adenine nucleotide transporter ADNT1 (Adenine nucleotide tran... more
Mitochondrial adenine nucleotide transporter ADNT1 (Adenine nucleotide transporter 1)
Scaffold_1150 46644 C T 10 37.77 intron Transition 0/1 Unannotated
Scaffold_1151 3664 A G 116 441.77 CDS Transition 0/1 Unannotated
Scaffold_1151 3677 A G 84 212.77 CDS Transition 0/1 Unannotated
Scaffold_1156 50047 C T 12 169.77 noncoding Transition 0/1 Unannotated
Scaffold_1158 18527 C T 11 36.77 CDS Transition 0/1 Hexokinase-2, chloroplastic (EC 2.7.1.1) (NtHxK2)
Scaffold_1168 24242 G A 17 49.77 exon Transition 0/1 Unannotated
Scaffold_1175 20806 T C 35 139.77 noncoding Transition 0/1 Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic (EC 2.5.1.54) ... more
Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic (EC 2.5.1.54) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2) (DAHP synthase 2) (Phospho-2-keto-3-deoxyheptonate aldolase 2)

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