2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_142 207482 A G 63 73.77 intron Transition 0/1 Unannotated
Scaffold_142 207737 T C 249 3187.75 CDS Transition 0/1 Unannotated
Scaffold_142 207767 G A 216 2302.77 CDS Transition 0/1 Unannotated
Scaffold_142 207782 A G 177 1431.77 CDS Transition 0/1 Unannotated
Scaffold_142 207973 G A 39 228.77 CDS Transition 0/1 Unannotated
Scaffold_142 207982 G A 32 199.77 CDS Transition 0/1 Unannotated
Scaffold_142 227624 T A,C 12 1173.77 intron Transition 1/2 Unannotated
Scaffold_142 528946 T C 34 41.77 CDS Transition 0/1 Unannotated
Scaffold_143 170745 C T 250 175.77 exon Transition 0/1 Photosynthetic NDH subunit of subcomplex B 2, chloroplastic (Protein PnsB2)... more
Photosynthetic NDH subunit of subcomplex B 2, chloroplastic (Protein PnsB2) (NAD(P)H DEHYDROGENASE SUBUNIT 45) (NDH-DEPENDENT CYCLIC ELECTRON FLOW 2)
Scaffold_143 319732 G A 53 69.77 intron Transition 0/1 Unannotated
Scaffold_144 274509 T C 10 189.77 exon Transition 0/1 Unannotated
Scaffold_144 387798 G A 22 379.77 CDS Transition 0/1 Unannotated
Scaffold_144 393274 G A 28 184.77 exon Transition 0/1 Unannotated
Scaffold_144 459169 A G 52 65.77 CDS Transition 0/1 Unannotated
Scaffold_145 67351 T C 44 218.77 noncoding Transition 0/1 Unannotated
Scaffold_145 99668 T C 25 227.77 CDS Transition 0/1 Pentatricopeptide repeat-containing protein At4g02750
Scaffold_145 404406 C T 238 95.77 exon Transition 0/1 Probable mediator of RNA polymerase II transcription subunit 37e (Heat shoc... more
Probable mediator of RNA polymerase II transcription subunit 37e (Heat shock 70 kDa protein 1) (Heat shock cognate 70 kDa protein 1) (Heat shock cognate protein 70-1) (AtHsc70-1) (Heat shock protein 70-1) (AtHsp70-1) (Protein EARLY-RESPONSIVE TO DEHYDRATI
Scaffold_145 404439 T C 160 438.77 exon Transition 0/1 Probable mediator of RNA polymerase II transcription subunit 37e (Heat shoc... more
Probable mediator of RNA polymerase II transcription subunit 37e (Heat shock 70 kDa protein 1) (Heat shock cognate 70 kDa protein 1) (Heat shock cognate protein 70-1) (AtHsc70-1) (Heat shock protein 70-1) (AtHsp70-1) (Protein EARLY-RESPONSIVE TO DEHYDRATI
Scaffold_145 411240 T C 19 421.77 exon Transition 0/1 Unannotated
Scaffold_145 411264 T C 13 240.77 exon Transition 0/1 Unannotated

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