2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_3187 18248 G A 69 409.77 CDS Transition 0/1 Unannotated
Scaffold_3190 40384 A G 104 31.77 intron Transition 0/1 Unannotated
Scaffold_3192 76 T C 250 446.77 noncoding Transition 0/1 Unannotated
Scaffold_3192 100 T C 250 255.77 noncoding Transition 0/1 Unannotated
Scaffold_3192 194 T C 249 626.77 noncoding Transition 0/1 Unannotated
Scaffold_3197 12795 G A 30 31.77 noncoding Transition 0/1 Unannotated
Scaffold_3200 7781 C T 29 624.77 intron Transition 0/1 Unannotated
Scaffold_3203 27967 A G 10 120.77 exon Transition 0/1 Unannotated
Scaffold_3209 29624 C T 19 169.77 noncoding Transition 0/1 Unannotated
Scaffold_3209 29641 G A 19 180.77 noncoding Transition 0/1 Unannotated
Scaffold_3219 33773 T C 16 42.77 CDS Transition 0/1 DNA (cytosine-5)-methyltransferase 3 (EC 2.1.1.37) (DNA methyltransferase 3... more
DNA (cytosine-5)-methyltransferase 3 (EC 2.1.1.37) (DNA methyltransferase 3) (DNA methyltransferase III) (Protein MATERNAL EFFECT EMBRYO ARREST 57)
Scaffold_3221 36350 C T 13 58.77 CDS Transition 0/1 Unannotated
Scaffold_3230 41081 G A 20 259.77 noncoding Transition 0/1 Unannotated
Scaffold_3236 35110 C T 23 550.77 CDS Transition 0/1 Cellulose synthase-like protein D3 (AtCslD3) (EC 2.4.1.-) (Protein KOJAK)
Scaffold_3236 35174 T C 12 34.77 CDS Transition 0/1 Cellulose synthase-like protein D3 (AtCslD3) (EC 2.4.1.-) (Protein KOJAK)
Scaffold_3240 43592 A G 111 920.77 CDS Transition 0/1 Unannotated
Scaffold_3240 43601 G A 110 848.77 CDS Transition 0/1 Unannotated
Scaffold_3243 72828 T C 41 395.77 exon Transition 0/1 Mediator of RNA polymerase II transcription subunit 13 (Protein GRAND CENTR... more
Mediator of RNA polymerase II transcription subunit 13 (Protein GRAND CENTRAL) (Protein MACCHI-BOU 2)
Scaffold_3243 73089 A G 41 239.77 exon Transition 0/1 Mediator of RNA polymerase II transcription subunit 13 (Protein GRAND CENTR... more
Mediator of RNA polymerase II transcription subunit 13 (Protein GRAND CENTRAL) (Protein MACCHI-BOU 2)
Scaffold_3243 73294 G A 47 227.77 exon Transition 0/1 Mediator of RNA polymerase II transcription subunit 13 (Protein GRAND CENTR... more
Mediator of RNA polymerase II transcription subunit 13 (Protein GRAND CENTRAL) (Protein MACCHI-BOU 2)

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